Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29c02
         (439 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2VZP2 Cluster: Fe-S oxidoreductase; n=7; Proteobacteri...    32   6.2  
UniRef50_Q9C6T6 Cluster: Putative uncharacterized protein F4M15....    32   6.2  

>UniRef50_Q2VZP2 Cluster: Fe-S oxidoreductase; n=7;
           Proteobacteria|Rep: Fe-S oxidoreductase -
           Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
          Length = 266

 Score = 31.9 bits (69), Expect = 6.2
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 156 CRIERYLALIEQGNVWMRLLQNIKFLFIYLEGRICGRPKAFPVRQAKI 299
           C  +R   ++EQ    +R L N+  +    E   CG   AF VRQA+I
Sbjct: 161 CHSQREAGVVEQPKALLRQLTNVTLVENPREKECCGFGGAFAVRQAEI 208


>UniRef50_Q9C6T6 Cluster: Putative uncharacterized protein F4M15.4;
           n=2; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F4M15.4 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1013

 Score = 31.9 bits (69), Expect = 6.2
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = -3

Query: 182 QCKIAFDTTHQPRSAIVEGAFLLVVRYIAVGPKHCSLARGKLQFKKI 42
           +C+ AF+  H+ +  +V  +  L V+ +  G KH +  +  L F ++
Sbjct: 649 ECREAFNGIHELKETLVRSSNTLAVKALKAGKKHINFVKSCLAFSEV 695


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,120,081
Number of Sequences: 1657284
Number of extensions: 7463043
Number of successful extensions: 16171
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16169
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)