Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29c02
         (439 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   0.89 
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    24   2.7  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           24   2.7  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           24   2.7  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    23   6.3  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    22   8.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   8.3  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    22   8.3  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.4 bits (53), Expect = 0.89
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 125 LPQQWRSAADVSYRTLSCIDRTGKCMDAIITK 220
           LP+   +     YR L+C+    K + ++IT+
Sbjct: 522 LPKDQNTKNPAKYRPLTCLSNLNKVLSSVITQ 553


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 188 TGKCMDAIITKY*VFIYLFGRKDLWSTEG-LSSKAGEDN 301
           TGK   ++ TKY V  Y     + W+T+  L+S+   +N
Sbjct: 50  TGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVEN 88


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 188 TGKCMDAIITKY*VFIYLFGRKDLWSTEG-LSSKAGEDN 301
           TGK   ++ TKY V  Y     + W+T+  L+S+   +N
Sbjct: 50  TGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVEN 88


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 188 TGKCMDAIITKY*VFIYLFGRKDLWSTEG-LSSKAGEDN 301
           TGK   ++ TKY V  Y     + W+T+  L+S+   +N
Sbjct: 50  TGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVEN 88


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 323 PVITMVFNYLRLPYWKGLRSTTNPSFQINK*KL 225
           P+   +FN +    WK LR+  +P+F   K K+
Sbjct: 55  PLTAHLFN-IEGQKWKNLRNKLSPTFTSGKMKM 86


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 281 WKGLRSTTNPSFQINK*KL 225
           WK LR+   P+F   K KL
Sbjct: 124 WKNLRAKLTPTFTSGKMKL 142


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 199  YGCDYYKILSFYLFIWKEGFVVD 267
            YG D + + S Y + WK GF  D
Sbjct: 1697 YGQDSHFMNSDYEYNWKNGFGED 1719


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 125 LPQQWRSAADVS-YRTLSCIDRTGKCMDAII 214
           LP+  +S  + S +R +  +D TGK ++ ++
Sbjct: 486 LPKPGKSPGEPSSFRPICLLDNTGKALERLL 516


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,694
Number of Sequences: 2352
Number of extensions: 7881
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)