Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29c02
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   2.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.5  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   4.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.9  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 119 ERLPQQWRSAADVSYRTLSCI 181
           ER+   W+  A VS R L C+
Sbjct: 415 ERMEFDWKQVALVSDRALLCV 435


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -3

Query: 185 DQCKIAFDTTHQPRSAIVEGAFLLVVRYIAVGPKHCSLARGKLQF 51
           ++ +IA    H PR A +      ++  +  G  HC+   G+ Q+
Sbjct: 561 EEQRIALRKYHAPRLAKLALESTSMIDVVRYGKPHCAEEIGRGQY 605


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -3

Query: 185 DQCKIAFDTTHQPRSAIVEGAFLLVVRYIAVGPKHCSLARGKLQF 51
           ++ +IA    H PR A +      ++  +  G  HC+   G+ Q+
Sbjct: 599 EEQRIALRKYHAPRLAKLALESTSMIDVVRYGKPHCAEEIGRGQY 643


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 52  LKKLQKNNVAIENWKLL 2
           +K   K+N  IE+WK +
Sbjct: 461 IKNADKDNEVIEDWKFV 477


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 117 EKGSLNNGGARLMCRIERYLALIE 188
           E   L   G  ++C + +YL LIE
Sbjct: 306 EARELQLPGCEVLCPLYKYLQLIE 329


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 117 EKGSLNNGGARLMCRIERYLALIE 188
           E   L   G  ++C + +YL LIE
Sbjct: 321 EARELQLPGCEVLCPLYKYLQLIE 344


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 297 SSPALLERPSVDHKSFLPNK 238
           SSP   + PS +H S +P++
Sbjct: 627 SSPHFHQSPSQNHSSAVPDQ 646


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,972
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)