Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29b20
         (246 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   0.97 
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   1.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   1.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   1.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   3.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   3.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   5.2  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    19   9.1  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    19   9.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   9.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   9.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   9.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   9.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   9.1  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.2 bits (45), Expect = 0.97
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +1

Query: 1   CPPVCSPPDCRPICGPASPLLCQSSVPPTQR--CYPVNPCI 117
           CP V   P C  IC P    +C+      ++  C P + C+
Sbjct: 54  CPNVVPKPLCIKICAPG--CVCRLGYLRNKKKVCVPRSKCL 92


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 1   CPPVCSPPDCRPICGP 48
           CP V   P C  IC P
Sbjct: 54  CPNVVPKPLCIKICAP 69


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 110 LASTYTAVTLKLCNAMDDFYSEFKN 184
           LAST T   +K+   + DF+  F N
Sbjct: 477 LASTTTTNDIKMQKVLIDFWVSFVN 501


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 110 LASTYTAVTLKLCNAMDDFYSEFKN 184
           LAST T   +K+   + DF+  F N
Sbjct: 477 LASTTTTNDIKMQKVLIDFWVSFVN 501


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +1

Query: 1   CPPVCSPPDCRPICGPASPLL 63
           C P C P    P     SPLL
Sbjct: 44  CLPFCGPNVINPFFCDMSPLL 64


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 183 FLNSL*KSSIALH 145
           FLN L KSS+ +H
Sbjct: 425 FLNQLKKSSVLVH 437


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 213 FYKTSVCF*PFLNSL*KSSIALHNLSVTAVYV 118
           +Y  S+C   F ++L   ++ LH+  V    V
Sbjct: 278 YYGVSICLVTFASALAVVTLNLHHRGVRGTRV 309


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 10 VCSPPDCRPICG 45
          V  P  CR ICG
Sbjct: 36 VIKPHICRKICG 47


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +1

Query: 97  YPVNPCI 117
           YP NPC+
Sbjct: 117 YPFNPCL 123


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 4/5 (80%), Positives = 4/5 (80%)
 Frame = -1

Query: 93  PLCWW 79
           P CWW
Sbjct: 487 PCCWW 491


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 4/5 (80%), Positives = 4/5 (80%)
 Frame = -1

Query: 93  PLCWW 79
           P CWW
Sbjct: 540 PCCWW 544


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +1

Query: 97  YPVNPCI 117
           YP NPC+
Sbjct: 133 YPFNPCL 139


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -3

Query: 139 ECNSCIC*CKDLQDSTVVLVARCSGKGAEMQVHRSDDNP 23
           EC    C    ++   VV   +C+ K  E +  +  D P
Sbjct: 241 ECRLKKCLTVGMRPECVVPEYQCAVKRKEEKAQKEKDKP 279


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +3

Query: 120 HIQLLHSNYVTQWTISIVNLKMVRNTHL 203
           H Q L  +   +W +   ++ + RN H+
Sbjct: 696 HTQRLVVHVPPRWIVEPTDVSVERNKHV 723


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,793
Number of Sequences: 438
Number of extensions: 1575
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4275738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)