Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29b19
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93023-2|CAI43176.1|  700|Homo sapiens sex comb on midleg-like 2...    31   3.2  
Y18004-1|CAB38943.1|  700|Homo sapiens SCML2 protein protein.          31   3.2  
BC064617-1|AAH64617.1|  700|Homo sapiens sex comb on midleg-like...    31   3.2  
BC051913-1|AAH51913.1|  733|Homo sapiens SCML2 protein protein.        31   3.2  
AL096763-3|CAI42221.1|  700|Homo sapiens sex comb on midleg-like...    31   3.2  
AL031007-1|CAI43048.1|  700|Homo sapiens sex comb on midleg-like...    31   3.2  

>Z93023-2|CAI43176.1|  700|Homo sapiens sex comb on midleg-like 2
           (Drosophila) protein.
          Length = 700

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +3

Query: 156 PSSIKLLMSNVNNIS------KMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDATSP 314
           P+++    S+V NI+        G K+K L +ICST   +  S +RD   LY   A+ P
Sbjct: 291 PTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGP 349


>Y18004-1|CAB38943.1|  700|Homo sapiens SCML2 protein protein.
          Length = 700

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +3

Query: 156 PSSIKLLMSNVNNIS------KMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDATSP 314
           P+++    S+V NI+        G K+K L +ICST   +  S +RD   LY   A+ P
Sbjct: 291 PTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGP 349


>BC064617-1|AAH64617.1|  700|Homo sapiens sex comb on midleg-like 2
           (Drosophila) protein.
          Length = 700

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +3

Query: 156 PSSIKLLMSNVNNIS------KMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDATSP 314
           P+++    S+V NI+        G K+K L +ICST   +  S +RD   LY   A+ P
Sbjct: 291 PTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGP 349


>BC051913-1|AAH51913.1|  733|Homo sapiens SCML2 protein protein.
          Length = 733

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +3

Query: 156 PSSIKLLMSNVNNIS------KMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDATSP 314
           P+++    S+V NI+        G K+K L +ICST   +  S +RD   LY   A+ P
Sbjct: 324 PTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGP 382


>AL096763-3|CAI42221.1|  700|Homo sapiens sex comb on midleg-like 2
           (Drosophila) protein.
          Length = 700

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +3

Query: 156 PSSIKLLMSNVNNIS------KMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDATSP 314
           P+++    S+V NI+        G K+K L +ICST   +  S +RD   LY   A+ P
Sbjct: 291 PTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGP 349


>AL031007-1|CAI43048.1|  700|Homo sapiens sex comb on midleg-like 2
           (Drosophila) protein.
          Length = 700

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +3

Query: 156 PSSIKLLMSNVNNIS------KMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDATSP 314
           P+++    S+V NI+        G K+K L +ICST   +  S +RD   LY   A+ P
Sbjct: 291 PTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGP 349


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,957,417
Number of Sequences: 237096
Number of extensions: 1894183
Number of successful extensions: 4811
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4801
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)