Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29b19
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024826-16|AAF60793.1| 170|Caenorhabditis elegans Hypothetical... 36 0.022
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 33 0.27
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 33 0.27
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 32 0.48
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 31 0.63
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 31 0.63
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 31 0.63
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 31 1.1
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 31 1.1
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 31 1.1
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 31 1.1
AL032626-3|CAA21540.1| 306|Caenorhabditis elegans Hypothetical ... 30 1.5
Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical pr... 30 1.9
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 30 1.9
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 30 1.9
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 30 1.9
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 30 1.9
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 30 1.9
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 30 1.9
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 30 1.9
AF039051-8|AAB94268.3| 309|Caenorhabditis elegans Serpentine re... 30 1.9
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 30 1.9
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 30 1.9
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 30 1.9
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 30 1.9
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 30 1.9
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 1.9
AF039051-7|AAB94267.2| 304|Caenorhabditis elegans Serpentine re... 29 2.5
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 5.9
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 5.9
AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical ... 28 5.9
>AC024826-16|AAF60793.1| 170|Caenorhabditis elegans Hypothetical
protein Y55F3AM.1 protein.
Length = 170
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 360 VVWN-----FYTPKADRNKIHDKNATPIGRKAKRIQRPKLIDKHISKRRALRSTQKRTEL 524
V WN ++ PK K DK TP R R L D KR + +T
Sbjct: 50 VYWNWAQLQYHNPKVQLVKHADKVVTPFARAYLNDGREVLFDLDGMKREEIEKLLAKTLG 109
Query: 525 FNDLIELNQNLSELIKKNPKESGVK 599
+L+E ++L + K NP + G K
Sbjct: 110 KTELVERREHLESIAKLNPADFGSK 134
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 15 KIFTFTNFV-ICHQL*FISTKHLCK*KETNETNIKRLIVSI*KKILFVPSSIKLLMSNVN 191
+IF F NF +C Q I TK L T ++ +VS + F P + ++++S V
Sbjct: 606 RIFFFRNFDDVCFQT--ILTKPLT----TFHFSVFYFLVS--HHLYFYPEAAEIVVSTVR 657
Query: 192 NISKMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDAT 308
+I G+ + ST +NNS + D DSL D D T
Sbjct: 658 DIDGTGSVNDTAD---STSLISNNSVANDRDSLKDDDKT 693
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical
protein C53B4.4b protein.
Length = 1586
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 15 KIFTFTNFV-ICHQL*FISTKHLCK*KETNETNIKRLIVSI*KKILFVPSSIKLLMSNVN 191
+IF F NF +C Q I TK L T ++ +VS + F P + ++++S V
Sbjct: 606 RIFFFRNFDDVCFQT--ILTKPLT----TFHFSVFYFLVS--HHLYFYPEAAEIVVSTVR 657
Query: 192 NISKMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDAT 308
+I G+ + ST +NNS + D DSL D D T
Sbjct: 658 DIDGTGSVNDTAD---STSLISNNSVANDRDSLKDDDKT 693
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical
protein C53B4.4a protein.
Length = 1584
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 15 KIFTFTNFV-ICHQL*FISTKHLCK*KETNETNIKRLIVSI*KKILFVPSSIKLLMSNVN 191
+IF F NF +C Q I TK L T ++ +VS + F P + ++++S V
Sbjct: 606 RIFFFRNFDDVCFQT--ILTKPLT----TFHFSVFYFLVS--HHLYFYPEAAEIVVSTVR 657
Query: 192 NISKMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDAT 308
+I G+ + ST +NNS + D DSL D D T
Sbjct: 658 DIDGTGSVNDTAD---STSLISNNSVANDRDSLKDDDKT 693
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 255 NNNSPSRDSDSLYDSDATSPVPFLCTQDGADGETDVVWNFYTPKADRNKIHDKNATPIGR 434
N + +SDS+Y + FL +Q+ E D + + K + K H
Sbjct: 68 NGSDLPTESDSIYSGPLQTFKKFLTSQEDDISEEDAIKKYNEYKTEHRK-HQLERFFRAH 126
Query: 435 KAKRIQRPKLIDKHISKRRA--LRSTQKRTELFNDLIELNQ 551
K + R K K R L + QKR ++FN+L E Q
Sbjct: 127 KDEEWFRLKYKPDDAKKLREAHLENVQKRLQVFNELKEQGQ 167
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 261 NSPSRDSDSLYDSDATSPVPFLCTQDGADGETDVVWNFYTPKADRNKIHDKNATPIGRKA 440
+ PS+ D +YDS + P DG VV Y + N++ K A G +
Sbjct: 293 HDPSQFEDDIYDSSDSEEDPDDYIADGHPTSAQVVE--YGNDVN-NRLKMKIAFQPGNEK 349
Query: 441 KRIQRPKLIDKH 476
KR++RPK + KH
Sbjct: 350 KRLKRPKGMKKH 361
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 261 NSPSRDSDSLYDSDATSPVPFLCTQDGADGETDVVWNFYTPKADRNKIHDKNATPIGRKA 440
+ PS+ D +YDS + P DG VV Y + N++ K A G +
Sbjct: 293 HDPSQFEDDIYDSSDSEEDPDDYIADGHPTSAQVVE--YGNDVN-NRLKMKIAFQPGNEK 349
Query: 441 KRIQRPKLIDKH 476
KR++RPK + KH
Sbjct: 350 KRLKRPKGMKKH 361
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 261 NSPSRDSDSLYDSDATSPVPFLCTQDGADGETDVVWNFYTPKADRNKIHDKNATPIGRKA 440
+ PS+ D +YDS + P DG VV Y + N++ K A G +
Sbjct: 293 HDPSQFEDDIYDSSDSEEDPDDYIADGHPTSAQVVE--YGNDVN-NRLKMKIAFQPGNEK 349
Query: 441 KRIQRPKLIDKH 476
KR++RPK + KH
Sbjct: 350 KRLKRPKGMKKH 361
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 480 SKRRALRSTQKRTELFNDLIELNQNLSELIKKNPKESGVKTHSGSEEDLFSDSSDYSPKK 659
SK+ + QK + N+N +++KK+ K+ K S SEED DSSD K+
Sbjct: 72 SKQHSKVQPQKVVAPVKRPADQNKNKEKVVKKDQKKQDKKADSDSEED---DSSDDEEKE 128
Query: 660 WT 665
T
Sbjct: 129 ET 130
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 480 SKRRALRSTQKRTELFNDLIELNQNLSELIKKNPKESGVKTHSGSEEDLFSDSSDYSPKK 659
SK+ + QK + N+N +++KK+ K+ K S SEED DSSD K+
Sbjct: 90 SKQHSKVQPQKVVAPVKRPADQNKNKEKVVKKDQKKQDKKADSDSEED---DSSDDEEKE 146
Query: 660 WT 665
T
Sbjct: 147 ET 148
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +3
Query: 423 PIGRKAKRIQRPKLIDKHISKRRALRSTQKRTELFNDLIELNQNLSELIKKNPKESGVKT 602
P+ A + +I+KH+ K +R+ +++ E+ DL+ L + S KN ++S
Sbjct: 106 PVRANAGSEENEVIIEKHVQKNVEIRNDEEKQEVQGDLV-LTLSSSPKSPKNLEKSFEVQ 164
Query: 603 HSGSEEDLFSDSSDYSPKK 659
E D+ + +P K
Sbjct: 165 QDDEEPDVLFEKVVKTPNK 183
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +3
Query: 423 PIGRKAKRIQRPKLIDKHISKRRALRSTQKRTELFNDLIELNQNLSELIKKNPKESGVKT 602
P+ A + +I+KH+ K +R+ +++ E+ DL+ L + S KN ++S
Sbjct: 106 PVRANAGSEENEVIIEKHVQKNVEIRNDEEKQEVQGDLV-LTLSSSPKSPKNLEKSFEVQ 164
Query: 603 HSGSEEDLFSDSSDYSPKK 659
E D+ + +P K
Sbjct: 165 QDDEEPDVLFEKVVKTPNK 183
>AL032626-3|CAA21540.1| 306|Caenorhabditis elegans Hypothetical
protein Y37D8A.3 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -2
Query: 414 FYHEFCCDQ--LSECKNSTQHQFLRQ 343
FYH+F C+Q LSEC + + H+ R+
Sbjct: 273 FYHKFACEQSSLSECVSQSMHRRFRR 298
>Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical
protein R17.2 protein.
Length = 628
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 465 IDKHISKRRALRSTQKRTELFNDLIELNQNLSELI 569
ID+H+ +AL T+K E++ + ELN+ + L+
Sbjct: 476 IDEHVKVLQALTCTRKLLEIYEETRELNKGIEVLV 510
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 447 IQRPKLIDKHISKRRALRSTQKRTELFNDLIELNQNLSELIKKNPKESGVKTHSGSEEDL 626
++RP+ +K ++K + R ++R + + L + I + PK++ K S SEE L
Sbjct: 342 MRRPESTEKELAKMK--REKRERRSMKSALKTFFKRNDAKISEQPKQTSRKDGSSSEEKL 399
Query: 627 FSDS 638
SD+
Sbjct: 400 SSDA 403
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 447 IQRPKLIDKHISKRRALRSTQKRTELFNDLIELNQNLSELIKKNPKESGVKTHSGSEEDL 626
++RP+ +K ++K + R ++R + + L + I + PK++ K S SEE L
Sbjct: 342 MRRPESTEKELAKMK--REKRERRSMKSALKTFFKRNDAKISEQPKQTSRKDGSSSEEKL 399
Query: 627 FSDS 638
SD+
Sbjct: 400 SSDA 403
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 953 FNDLLQLTQNLLAIINEGPATEQVPSH 979
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 934 FNDLLQLTQNLLAIINEGPATEQVPSH 960
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 990 FNDLLQLTQNLLAIINEGPATEQVPSH 1016
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 944 FNDLLQLTQNLLAIINEGPATEQVPSH 970
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 944 FNDLLQLTQNLLAIINEGPATEQVPSH 970
>AF039051-8|AAB94268.3| 309|Caenorhabditis elegans Serpentine
receptor, class x protein7 protein.
Length = 309
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 455 TLNSFSFPTNGCCIFIMNFVAISFRSVKIPHNISFSVSSIL 333
T + + FP CCIFI + +S+ +V IP+ S+S IL
Sbjct: 140 TFSQYIFP---CCIFIGDISIMSYMAVTIPNVYSYSKLIIL 177
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 944 FNDLLQLTQNLLAIINEGPATEQVPSH 970
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 953 FNDLLQLTQNLLAIINEGPATEQVPSH 979
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 944 FNDLLQLTQNLLAIINEGPATEQVPSH 970
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 934 FNDLLQLTQNLLAIINEGPATEQVPSH 960
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 525 FNDLIELNQNLSELIKKNPKESGVKTH 605
FNDL++L QNL +I + P V +H
Sbjct: 990 FNDLLQLTQNLLAIINEGPATEQVPSH 1016
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 570 KKNP-KESGVKTHSGSEEDLFSDS-SDYSPKKWTKN 671
+K+P K S K + S D SDS SD+ KKW KN
Sbjct: 202 EKSPRKRSSKKRRAASVSDSDSDSDSDFDKKKWKKN 237
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/109 (21%), Positives = 42/109 (38%)
Frame = +3
Query: 342 ADGETDVVWNFYTPKADRNKIHDKNATPIGRKAKRIQRPKLIDKHISKRRALRSTQKRTE 521
+D ++D +F K +NK ++R + K K + + ++KR
Sbjct: 219 SDSDSDSDSDFDKKKWKKNKAKRSKRDDSSDDDSEMERRRKKSKKSKKSKKFKKSEKRKR 278
Query: 522 LFNDLIELNQNLSELIKKNPKESGVKTHSGSEEDLFSDSSDYSPKKWTK 668
ND +++ E +K K+S S ED + S K +K
Sbjct: 279 AVNDSSSDDEDEEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSKKSK 327
>AF039051-7|AAB94267.2| 304|Caenorhabditis elegans Serpentine
receptor, class x protein8 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 455 TLNSFSFPTNGCCIFIMNFVAISFRSVKIPHNISFSVSSIL 333
T + + FP CCIF+ + +S+ +V IP+ S+S IL
Sbjct: 140 TFSQYIFP---CCIFVGDISIMSYMAVTIPNVYSYSKLIIL 177
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 381 PKADRNKIHDKNATPIGRKAKRIQRPKLIDKHISKRR 491
P+ D++++H+++ + GRK ++ P+ + KR+
Sbjct: 191 PRLDKHRVHERSESSNGRKKSEVKPPRQMTDQERKRQ 227
>Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical
protein F58G11.6 protein.
Length = 528
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 76 CFVEINYNWWQITKLVNVKILSVV 5
CFV+ + +WW + K VN ++L ++
Sbjct: 474 CFVKSSSDWWIVIKKVNSRLLVLI 497
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 396 CDQLSECKNSTQHQFLRQLHLVCIKRELD 310
CD + C +S H++ R+L L IK+ L+
Sbjct: 718 CDDVEGCDSSYMHRYRRELSLEDIKKALE 746
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 396 CDQLSECKNSTQHQFLRQLHLVCIKRELD 310
CD + C +S H++ R+L L IK+ L+
Sbjct: 559 CDDVEGCDSSYMHRYRRELSLEDIKKALE 587
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 396 CDQLSECKNSTQHQFLRQLHLVCIKRELD 310
CD + C +S H++ R+L L IK+ L+
Sbjct: 599 CDDVEGCDSSYMHRYRRELSLEDIKKALE 627
>AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical
protein Y57A10A.9 protein.
Length = 158
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 159 SSIKLLMSNVNNISKMGAKDKNLRLICSTPEQNNNSPSRDSDSLYDSDATSPV 317
S K+L +NV NI K T +Q++ SPS S S S ++SPV
Sbjct: 107 SKNKVLFANVLNI--FADLQKEAENFSKTTKQSSTSPSSSSSSEESSASSSPV 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,553,614
Number of Sequences: 27780
Number of extensions: 323332
Number of successful extensions: 1092
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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