Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29b19
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    26   0.41 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    26   0.41 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    26   0.41 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.72 
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   3.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.9  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   3.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.7  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   8.9  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +3

Query: 111 IKRLIVSI*KKILFVPSSIKLLMSNVNNISKMGAKDKNLRLICSTPEQNNNSPSRDSDSL 290
           +K L VS+   +L V  +I+  MS    I +     KNLR +CS   + N++P    D  
Sbjct: 1   MKGLGVSLLVALLLVLLAIEDTMSKKMTIEEAKKTIKNLRKVCS---KKNDTPKELLDGQ 57

Query: 291 YDSDATSPVPFLC 329
           +  +       +C
Sbjct: 58  FRGEFPQDERLMC 70


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 497 ECSAF*NMFINKFWTLNSFSFPTNG 423
           +CSA  N      W L+ F+ PTNG
Sbjct: 442 KCSAAGNPTPQVTWALDGFALPTNG 466


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 497 ECSAF*NMFINKFWTLNSFSFPTNG 423
           +CSA  N      W L+ F+ PTNG
Sbjct: 442 KCSAAGNPTPQVTWALDGFALPTNG 466


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 606 SGSEEDLFSDSSDYSPKKWT 665
           +G  E+ F D+  Y P++WT
Sbjct: 426 AGLNEENFKDAKKYLPERWT 445


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 616 KRIYLVIHLIIHQKSGRKTKTQLLTEKC 699
           ++I++ I +I H  SG+ T T  L  KC
Sbjct: 4   EKIHINIVVIGHVDSGKSTTTGHLIYKC 31


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 543 LNQNLSELIKKNPKESGVKTHSGSEEDLFSDS 638
           +NQ  SELI+  P+ +  K  +G  +   SD+
Sbjct: 259 VNQKFSELIQSKPQHARRKVLAGIVQTKGSDA 290


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 616 KRIYLVIHLIIHQKSGRKTKTQLLTEKC 699
           ++I++ I +I H  SG+ T T  L  KC
Sbjct: 4   EKIHINIVVIGHVDSGKSTTTGHLIYKC 31


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 541 SIRSLNNSVLFCVERSALR 485
           S+ +L+ SVL C +RSA R
Sbjct: 42  SLSNLDMSVLECADRSAPR 60


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 541 SIRSLNNSVLFCVERSALR 485
           S+ +L+ SVL C +RSA R
Sbjct: 132 SLSNLDMSVLECADRSAPR 150


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 180 SNVNNISKMGAKDKNLRLICSTPEQNNNSPSRD 278
           +N   I++ G +   LRL+CS     + S   D
Sbjct: 62  ANKGMINQYGGEQPTLRLLCSIAGGTSESQWED 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,508
Number of Sequences: 438
Number of extensions: 3690
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)