Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29b17
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47075-1|CAA87382.2| 308|Caenorhabditis elegans Hypothetical pr... 249 2e-66
U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical pr... 31 0.73
AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like ... 30 1.7
AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical ... 30 1.7
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 28 5.2
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 28 6.8
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 28 6.8
AF039042-8|AAC48243.1| 337|Caenorhabditis elegans Serpentine re... 28 6.8
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 27 9.1
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z47075-1|CAA87382.2| 308|Caenorhabditis elegans Hypothetical
protein E02H1.1 protein.
Length = 308
Score = 249 bits (609), Expect = 2e-66
Identities = 119/192 (61%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Frame = +3
Query: 93 MPKIKAEKKTRIHKEIAK-QGIQFNKDFGQHILKNPLIITSMLDKSGLRPTDVALEIGPG 269
M K KKT+ Q + FN D GQHILKNP ++ ++++KS L+ TD LE+GPG
Sbjct: 1 MGKTSKVKKTKAGSSTGNVQSLPFNTDKGQHILKNPGVVNAIVEKSALKATDTVLEVGPG 60
Query: 270 TGNMTVKLLDRVKKVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICV 449
TGN+TVK+L+ K V+ACEID R++AE++KRV GTP Q KLQ+ GDV+K E PFFD+CV
Sbjct: 61 TGNLTVKMLEVAKTVIACEIDPRMIAEVKKRVMGTPLQNKLQVNGGDVMKMEWPFFDVCV 120
Query: 450 ANIPYQISSPLVFKLLLHRPFFRCAVLMFQKEFAQRLVAKPGDKLYCRLSINTQLLARVD 629
AN+PYQISSP V KLLLHRP R AVLMFQKEFA RLVA+PGDK Y RLS+N QLLA+V+
Sbjct: 121 ANLPYQISSPFVQKLLLHRPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVE 180
Query: 630 MLMKVGKNNFRP 665
MLMKV + FRP
Sbjct: 181 MLMKVKRTEFRP 192
>U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical
protein T03F1.7 protein.
Length = 367
Score = 51.2 bits (117), Expect = 6e-07
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 28/199 (14%)
Frame = +3
Query: 153 IQFNKDFGQHILKNPLIITSMLDKSGLRPTDVALEIGPGTGNMTVKLLDR-VKKVLACEI 329
++ K Q+ L + I + + + D +EIGPG G +T +L+ ++ EI
Sbjct: 22 LRAKKILSQNYLMDMNITRKIAKHAKVIEKDWVIEIGPGPGGITRAILEAGASRLDVVEI 81
Query: 330 DTRLVAELQKRVQGTP------YQAKLQILVGDVLKTE-------------LPFFDICVA 452
D R + LQ + +Q L+ +GD+ K E LP + +
Sbjct: 82 DNRFIPPLQHLAEAADSRMFIHHQDALRTEIGDIWKNETARPESVDWHDSNLPAMHV-IG 140
Query: 453 NIPYQISSPLVFKLLLHRPFFRCA--------VLMFQKEFAQRLVAKPGDKLYCRLSINT 608
N+P+ I+SPL+ K L + R L FQ E A+RL + R+SI +
Sbjct: 141 NLPFNIASPLIIKYLRDMSYRRGVWQYGRVPLTLTFQLEVAKRLCSPIACDTRSRISIMS 200
Query: 609 QLLARVDMLMKVGKNNFRP 665
Q +A M+ ++ + F P
Sbjct: 201 QYVAEPKMVFQISGSCFVP 219
>Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical
protein C38D4.9 protein.
Length = 214
Score = 31.1 bits (67), Expect = 0.73
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +3
Query: 252 LEIGPGTGNM--TVKLLDRVKKVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVL--K 419
++IG G G + T + ++ VL +ID + + ++ Q + ++L D+L +
Sbjct: 52 IDIGCGCGMLMTTAATMYELETVLGVDIDDEALKICSRNLETAEVQDRCELLQADILDPE 111
Query: 420 TELP--FFDICVANIPY 464
++LP FD+ V N P+
Sbjct: 112 SDLPRGTFDVAVINPPF 128
>AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like
protein protein.
Length = 351
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/93 (24%), Positives = 44/93 (47%)
Frame = +3
Query: 309 KVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICVANIPYQISSPLVF 488
++L EID ++ + +QG L ++ T +PFF + +AN + + + VF
Sbjct: 7 QILDLEIDKKVKSSSSSIIQGLCSIQLLSMIAVTAHHTAMPFF-VQMANTSHFLPTTSVF 65
Query: 489 KLLLHRPFFRCAVLMFQKEFAQRLVAKPGDKLY 587
+ + + F C +++ F + K G KLY
Sbjct: 66 MMEVLKLLF-CLIIVL---FKTKSFEKTGKKLY 94
>AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical
protein F44C8.7 protein.
Length = 351
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/93 (24%), Positives = 44/93 (47%)
Frame = +3
Query: 309 KVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICVANIPYQISSPLVF 488
++L EID ++ + +QG L ++ T +PFF + +AN + + + VF
Sbjct: 7 QILDLEIDKKVKSSSSSIIQGLCSIQLLSMIAVTAHHTAMPFF-VQMANTSHFLPTTSVF 65
Query: 489 KLLLHRPFFRCAVLMFQKEFAQRLVAKPGDKLY 587
+ + + F C +++ F + K G KLY
Sbjct: 66 MMEVLKLLF-CLIIVL---FKTKSFEKTGKKLY 94
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 273 GNMTVKLLDRVKK-VLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICV 449
GN T+K ++K +ID + + K + T + + + D+ K EL FD+ +
Sbjct: 427 GNTTLKREKSIEKSTRQGKIDKSIEKLIDKSIDNTEKLSSQKPKI-DMAKGELRKFDVDI 485
Query: 450 ANIPYQISSPLVFK 491
IP + P+V K
Sbjct: 486 NEIPIRFEGPMVNK 499
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 215 VRQIWIKAY*CST*DWSWYWQ-YDSQIAGQ 301
V Q WI Y T W W WQ + +AG+
Sbjct: 212 VLQFWILTYFLETKSWMWGWQTFQDLMAGR 241
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 212 YVRQIWIKAY*CST*DWSWYWQYDSQIAGQSKKGISL 322
YV++I ++ T WS YW+Y + K GI L
Sbjct: 760 YVKEIVYESRKSGTISWSVYWEYTRGVINPLKYGIWL 796
>AF039042-8|AAC48243.1| 337|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 25 protein.
Length = 337
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -1
Query: 452 CYTYIKKW*FCFQNISNQNL*FCLIRSTLHTFLKFSNQSCINFTG*YLFYSVQQFDCHIA 273
C ++ +CF N++ + F L + LH F++ + C+ + YS+ + HI
Sbjct: 244 CLDFVFMMVYCFGNLATNFIDFSLSQGKLHGFIEMVH--CLPVYAIVVTYSMARVIKHIQ 301
Query: 272 STRTN 258
+T+
Sbjct: 302 KRKTS 306
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -2
Query: 577 SPGFATNLCANSF*NMSTAHLKKG-LCSSNLNTKGELI*YGIFATHISKNGNS 422
SPGF C + STAH G C +NT + + + H K N+
Sbjct: 358 SPGFTGERCETNIDECSTAHCPSGATCVDQVNTHICVCPFNLTGVHCDKMINT 410
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 2 FFFLIVLYLYH*PLRCKSIYYFVKLSCVI 88
F + + ++LY +R YYFVK S ++
Sbjct: 63 FSYYLTMFLYRILVRLLQFYYFVKFSAIL 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,345,753
Number of Sequences: 27780
Number of extensions: 297520
Number of successful extensions: 712
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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