Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29b08
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 33 0.15
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 32 0.34
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.45
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 32 0.45
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.45
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 32 0.45
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 31 0.60
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 31 0.79
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.79
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.79
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.79
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.79
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 31 0.79
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.79
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 1.4
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 30 1.4
AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical ... 30 1.8
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 3.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 3.2
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 3.2
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 3.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.2
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41007-4|AAA82266.1| 659|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 5.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 5.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 5.5
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 7.3
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 7.3
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 28 7.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 7.3
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 27 9.7
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 27 9.7
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 27 9.7
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr... 27 9.7
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 27 9.7
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 27 9.7
AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical... 27 9.7
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 27 9.7
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 27 9.7
AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical ... 27 9.7
AC017117-7|AAF16620.3| 110|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 109 ETISYLEAGMSRGPEN-PHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMG 285
++++ L+ GM R P P + P + P + PG+ +++ P G + G G
Sbjct: 1283 QSVNALQYGMHRQPMGGPQSMQMNPSSVGQPGS-VGGPGSHQQHMMNPGSVGPGSVGGPG 1341
Query: 286 PIGPWAPGHIDWTP 327
+ P + G+ W P
Sbjct: 1342 SVNPGSVGYPQWNP 1355
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 109 ETISYLEAGMSRGPEN-PHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMG 285
++++ L+ GM R P P + P + P + PG+ +++ P G + G G
Sbjct: 1277 QSVNALQYGMHRQPMGGPQSMQMNPSSVGQPGS-VGGPGSHQQHMMNPGSVGPGSVGGPG 1335
Query: 286 PIGPWAPGHIDWTP 327
+ P + G+ W P
Sbjct: 1336 SVNPGSVGYPQWNP 1349
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 109 ETISYLEAGMSRGPEN-PHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMG 285
++++ L+ GM R P P + P + P + PG+ +++ P G + G G
Sbjct: 1283 QSVNALQYGMHRQPMGGPQSMQMNPSSVGQPGS-VGGPGSHQQHMMNPGSVGPGSVGGPG 1341
Query: 286 PIGPWAPGHIDWTP 327
+ P + G+ W P
Sbjct: 1342 SVNPGSVGYPQWNP 1355
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 109 ETISYLEAGMSRGPEN-PHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMG 285
++++ L+ GM R P P + P + P + PG+ +++ P G + G G
Sbjct: 1277 QSVNALQYGMHRQPMGGPQSMQMNPSSVGQPGS-VGGPGSHQQHMMNPGSVGPGSVGGPG 1335
Query: 286 PIGPWAPGHIDWTP 327
+ P + G+ W P
Sbjct: 1336 SVNPGSVGYPQWNP 1349
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.34
Identities = 28/82 (34%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Frame = +1
Query: 100 PAGETISYLEAGMSRGPENPHASPYVPGLIQPPEK-----KIYPPGAPPRYLPQPTDSTS 264
P GE + G GP P P G PP K K PPG P + +D
Sbjct: 211 PTGEPGKVIN-GAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLP 269
Query: 265 GDILGMGPIG-PWAPGHIDWTP 327
G G GP G P PG D P
Sbjct: 270 GPHGGTGPRGPPGQPGSCDHCP 291
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +1
Query: 133 GMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
GM P P PG + PP YP P Y P P G G I P P
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 451 NWETTTKKDLANAFSGMDNKLADVNNKLEKRVKDLSHWKREVEKAVL 591
NW+T K+ L +A ++ ++++V DL HW ++V + +L
Sbjct: 2079 NWKTKAKERLTDAMELLNLRMSEVQTLWLANRDDLLHWMKQVTECLL 2125
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +1
Query: 133 GMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
GM P P PG + PP YP P Y P P G G I P P
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-mediated
mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 451 NWETTTKKDLANAFSGMDNKLADVNNKLEKRVKDLSHWKREVEKAVL 591
NW+T K+ L +A ++ ++++V DL HW ++V + +L
Sbjct: 2079 NWKTKAKERLTDAMELLNLRMSEVQTLWLANRDDLLHWMKQVTECLL 2125
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 31.5 bits (68), Expect = 0.60
Identities = 37/94 (39%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Frame = +1
Query: 49 TEDPSKTCPYICPTTIKPAGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYP---- 216
T DP+K C +CP P G T E G S GPE P P PG I ++ YP
Sbjct: 142 TIDPTKGCR-VCPNG--PRGPTGPPGETGPS-GPEGP---PGNPGRIGEHGREGYPGQQG 194
Query: 217 -PGAP--PRYL----PQPTDSTSGDILGMGPIGP 297
PG P P L P D T G GPIGP
Sbjct: 195 IPGEPGKPGKLGEAGPNGRDGTRGQ---KGPIGP 225
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.79
Identities = 27/76 (35%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYP--PGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHID 318
GP P +P PG P P PG PP +PT GP GP P
Sbjct: 105 GPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP 164
Query: 319 WTP-HAGTTGVRPVVD 363
P AGT G RP D
Sbjct: 165 GDPGEAGTPG-RPGTD 179
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.79
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = +1
Query: 133 GMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPGH 312
G GP P P V G PP +P G P R P G +GP GP P
Sbjct: 148 GGEAGPPGPDGEPGVRGPNGPPGPNGHP-GQPGRPGPAGPAGPEGKDGPVGPHGPAGPAG 206
Query: 313 IDWTPH-AGTTG 345
T H AG G
Sbjct: 207 PRGTRHSAGVPG 218
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.1 bits (67), Expect = 0.79
Identities = 27/76 (35%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYP--PGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHID 318
GP P +P PG P P PG PP +PT GP GP P
Sbjct: 100 GPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP 159
Query: 319 WTP-HAGTTGVRPVVD 363
P AGT G RP D
Sbjct: 160 GDPGEAGTPG-RPGTD 174
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.79
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYP--PGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHID 318
GP P P PG P P PG PP +PT GP GP P
Sbjct: 107 GPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAP 166
Query: 319 WTP-HAGTTGVRPVVD 363
P AGT G RP D
Sbjct: 167 GDPGEAGTPG-RPGTD 181
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.1 bits (67), Expect = 0.79
Identities = 27/76 (35%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYP--PGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHID 318
GP P +P PG P P PG PP +PT GP GP P
Sbjct: 100 GPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP 159
Query: 319 WTP-HAGTTGVRPVVD 363
P AGT G RP D
Sbjct: 160 GDPGEAGTPG-RPGTD 174
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +1
Query: 133 GMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
G++ P P P P + PP K P G P P D G + GP GP P
Sbjct: 116 GLNGNPGRPPKEPCEP--LTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGP 171
Score = 28.3 bits (60), Expect = 5.5
Identities = 29/101 (28%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Frame = +1
Query: 49 TEDPSKTCPYICPTTIKPAGETISYLEAGMSR--GPENPHASPYVPGLIQPPEKKIYPPG 222
T P K CP P P G + G GPE P+ P G PP P G
Sbjct: 133 TPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPG----PGG 188
Query: 223 APPRYLPQPTDSTSGDILGMGPIGPWAPGHIDWTPHAGTTG 345
P P + +G+ P P PG AG G
Sbjct: 189 KPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRGPAGEPG 229
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 31.1 bits (67), Expect = 0.79
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 214 PPGAPPRYLPQPTDS 258
PP APP++LP PTDS
Sbjct: 502 PPPAPPQFLPNPTDS 516
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.79
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYP--PGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHID 318
GP P P PG P P PG PP +PT GP GP P
Sbjct: 107 GPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAP 166
Query: 319 WTP-HAGTTGVRPVVD 363
P AGT G RP D
Sbjct: 167 GDPGEAGTPG-RPGTD 181
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYP--PGAPPRYLPQPTDSTSGDILGMGPIGP 297
GP+ P +P PG P P PG PP+ +PT GP GP
Sbjct: 93 GPQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGP 145
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 136 MSRGPENPHASPYVPGLIQPPEKKIYPPGAP--PRYLPQPT 252
+ RGPE P A+ +PG + P + PGAP P + QP+
Sbjct: 163 VQRGPEAPAAALPMPGAPERPAVALPMPGAPEGPAAIQQPS 203
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 55 DPSKTCPYICPT-TIKPAGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPP 231
+PS+ P PT P+G S G GP NP +P G P P GAPP
Sbjct: 201 NPSEAPPSGGPTGPFDPSGAPPS----GGPPGPFNPSGAPPSGG----PPGPFDPSGAPP 252
Query: 232 RYLPQPTDSTSGDILGMGPIGPWAP 306
P + SG GP GP+ P
Sbjct: 253 SGGPPGPFNPSGAPPSGGPPGPFDP 277
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P + SG GP GP+ P
Sbjct: 403 SGGPPGPFNPSGAPPSGG----PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 457
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P + SG GP GP+ P
Sbjct: 418 SGGPPGPFNPSGAPPSGG----PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 472
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P + SG GP GP+ P
Sbjct: 433 SGGPPGPFNPSGAPPSGG----PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 487
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/72 (33%), Positives = 29/72 (40%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPG 309
+G GP +P +P G P P GAPP P SG GP GP+ P
Sbjct: 148 SGGPPGPFDPSGAPPSGG----PPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPS 203
Query: 310 HIDWTPHAGTTG 345
+ P G TG
Sbjct: 204 --EAPPSGGPTG 213
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P + SG GP GP+ P
Sbjct: 313 SGGPPGPFNPSGAPPSGG----PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 367
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P SG GP GP+ P
Sbjct: 448 SGGPPGPFNPSGAPPSGG----PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 502
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P + SG GP GP+ P
Sbjct: 463 SGGPPGPFNPSGAPPSGG----PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 517
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P + SG GP GP+ P
Sbjct: 193 SGGPPGPFNPSEAPPSGG----PTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 247
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P SG GP GP+ P
Sbjct: 253 SGGPPGPFNPSGAPPSGG----PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 307
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP NP +P G P P GAPP P SG GP GP+ P
Sbjct: 343 SGGPPGPFNPSGAPPSGG----PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 397
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP +P +P G P P GAPP P + SG GP GP+ P
Sbjct: 388 SGGPPGPFDPSGAPPSGG----PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 442
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP +P +P G P P GAPP P SG GP GP+ P
Sbjct: 238 SGGPPGPFDPSGAPPSGG----PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 292
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = +1
Query: 148 PENPHASPYVPGLIQP---PEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
P P+ P QP P P GAPP P SG GP GP+ P
Sbjct: 297 PSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP 352
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +1
Query: 130 AGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
+G GP +P +P G P P GAPP P SG GP GP+ P
Sbjct: 328 SGGPPGPFDPSGAPPSGG----PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 382
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 538 KRVKDLSHWKREVEKAVLAITDEI--NVLDQDRGRLKGACR 654
KR+K K EV KA+LA+TDE + ++ G+LK AC+
Sbjct: 1075 KRLKSEGK-KPEVMKAILALTDETTGDAKEKAEGKLKEACK 1114
>AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.5 protein.
Length = 292
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 346 VRPVVDKYSITRYSTGEWRKNNEYVLTPRATDKARNWETTTKKDL 480
++ + D + R STGE K LT RAT K R + TTK +L
Sbjct: 202 LKEIKDHFDRIRQSTGEKEKQLTDELTARAT-KIREMDNTTKANL 245
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +1
Query: 133 GMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
G++ P P P P I PP K P G P P G + GP GP P
Sbjct: 114 GLNGNPGRPPKEPCEP--ITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGP 169
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPG 309
GP P P PG P P G P P P D P GP PG
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.2
Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +1
Query: 100 PAGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQP-TDSTSGDIL 276
PAG+ S +AG P P S + P + P G PP QP + ST G
Sbjct: 174 PAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQG-PPGAPGQPGSGSTPGPAG 232
Query: 277 GMGPIGP-WAPGHIDWTPHAGTTG 345
GP GP PGH G G
Sbjct: 233 PPGPPGPNGQPGHPGQDGQPGAPG 256
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPG 309
GP P P PG P P G P P P D P GP PG
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = +1
Query: 346 VRPVVDKYSITRYSTGEWRKNNEYVLTPRATDKARNWETTTKKDLANAFSGMDNKLADVN 525
+R + D++S + +WR + L R D ++ T + DL + N+L
Sbjct: 1316 LRSLEDQHSTLQSDANKWRGELDAAL--RENDILKSNNTNMETDLTR----LKNRLKSAE 1369
Query: 526 NKLEKRVKDLSHWKREVEKAVLAITDEINVLD 621
+ L++ LSH K E E+ A ++ D
Sbjct: 1370 DALKELKNSLSHAKTEKERLQNAFREKTKQAD 1401
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = +1
Query: 346 VRPVVDKYSITRYSTGEWRKNNEYVLTPRATDKARNWETTTKKDLANAFSGMDNKLADVN 525
+R + D++S + +WR + L R D ++ T + DL + N+L
Sbjct: 1389 LRSLEDQHSTLQSDANKWRGELDAAL--RENDILKSNNTNMETDLTR----LKNRLKSAE 1442
Query: 526 NKLEKRVKDLSHWKREVEKAVLAITDEINVLD 621
+ L++ LSH K E E+ A ++ D
Sbjct: 1443 DALKELKNSLSHAKTEKERLQNAFREKTKQAD 1474
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = +1
Query: 346 VRPVVDKYSITRYSTGEWRKNNEYVLTPRATDKARNWETTTKKDLANAFSGMDNKLADVN 525
+R + D++S + +WR + L R D ++ T + DL + N+L
Sbjct: 1389 LRSLEDQHSTLQSDANKWRGELDAAL--RENDILKSNNTNMETDLTR----LKNRLKSAE 1442
Query: 526 NKLEKRVKDLSHWKREVEKAVLAITDEINVLD 621
+ L++ LSH K E E+ A ++ D
Sbjct: 1443 DALKELKNSLSHAKTEKERLQNAFREKTKQAD 1474
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPG 309
GP P P PG P P G P P P D P GP PG
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPG 309
GP P P PG P P G P P P D P GP PG
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +1
Query: 88 TTIKPAGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSG 267
TT+K + ++S S + H + L + PP APP P ST+
Sbjct: 524 TTLKTSTTSVSTTSEATSPSKTSRHFDRFTADLNSSTRARPTPPMAPPIMSPSTEFSTTT 583
Query: 268 ----DILGMGPIGPWAPGHIDWTPHAGTTGVRPVVDKYSITRYSTGEWRKNNEYV 420
D+ G+ A + T + + RYS G W KNN+ V
Sbjct: 584 TEEEDVTGVIRSSSIASRATTYGFFTATKPSAFLDPECRDMRYSCGFWLKNNKQV 638
>U41007-4|AAA82266.1| 659|Caenorhabditis elegans Hypothetical
protein C33H5.9 protein.
Length = 659
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +1
Query: 505 NKLADVNNKLEKRVKDLSHWKREVEKAVLAITDEINVLDQDRGRLKGACRIL 660
++L + N + ++K L H + V V+ + D++ +DQ R R A +++
Sbjct: 40 HRLHEKNGEAIDKMKQLDHTMQAVSTKVVHLGDQLESVDQPRSRAHDAHQLM 91
>U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical
protein F53B3.1 protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 193 PPEKKIYPPGAPPRYLPQPTDSTSG 267
PPE +I P P Y+P P ++ G
Sbjct: 279 PPENEISQPSEDPNYIPLPGENNGG 303
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 8/42 (19%)
Frame = +1
Query: 148 PENPHASPYVPG--------LIQPPEKKIYPPGAPPRYLPQP 249
P PH P++ G L PP + PP PP Y QP
Sbjct: 65 PPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQP 106
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 466 TKKDLANAFSGMDNKLADVNNKLEKRVKDLSHWKR 570
T +DL AF+ DN D ++ K KD S WK+
Sbjct: 102 TSRDLYEAFTEGDNDAVDKISEWLKSEKDESSWKK 136
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/78 (33%), Positives = 31/78 (39%)
Frame = +1
Query: 85 PTTIKPAGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTS 264
P T+ P+ E S GP NP P G PP P P PQP+ S
Sbjct: 90 PGTVAPSDEPSP--SGPPSPGPVNPSEDPQPSG---PPS----PGPVDPSEDPQPSVEPS 140
Query: 265 GDILGMGPIGPWAPGHID 318
D P GP +PG +D
Sbjct: 141 ED---HQPSGPPSPGPVD 155
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 73 PYICPTTIKPAGETISYLEAGMSRGPENPHASPYVPGL--IQPPEKKIYPPGAPP-RYLP 243
P + P +KP G +Y + R P + +S G+ + PP+ + PP PP + +P
Sbjct: 1378 PGMGPPVVKPHGN--NYQASQWVRPPTHRDSSHSYHGMPSLGPPQLQREPPAPPPPQMIP 1435
Query: 244 QPTD 255
P D
Sbjct: 1436 LPKD 1439
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 73 PYICPTTIKPAGETISYLEAGMSRGPENPHASPYVPGL--IQPPEKKIYPPGAPP-RYLP 243
P + P +KP G +Y + R P + +S G+ + PP+ + PP PP + +P
Sbjct: 1378 PGMGPPVVKPHGN--NYQASQWVRPPTHRDSSHSYHGMPSLGPPQLQREPPAPPPPQMIP 1435
Query: 244 QPTD 255
P D
Sbjct: 1436 LPKD 1439
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGM-GPIGPWAP 306
GP+N + + PG PP P G PR P + D G+ GP GP P
Sbjct: 226 GPKNFYITSGPPGPPGPPGPPGNPGGIGPRGPPGDPGIMTQDSRGVEGPSGPSGP 280
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 PHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHIDWTPHAG 336
P +P PG Q P PGAPP +P G GM P P P + TP G
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP--PLIPTRVP-TPSNG 823
Query: 337 TTGV--RPVVDK 366
+ RP V K
Sbjct: 824 APEIPARPQVPK 835
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 142 RGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHIDW 321
+GP+ P+ +P PG P + P P +P ++G+ +GP GP D
Sbjct: 186 QGPKGPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEP--GSTGEPGPVGPPGPSGQPGNDG 243
Query: 322 TP 327
TP
Sbjct: 244 TP 245
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 142 RGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHIDW 321
+GP+ P+ +P PG P + P P +P ++G+ +GP GP D
Sbjct: 186 QGPKGPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEP--GSTGEPGPVGPPGPSGQPGNDG 243
Query: 322 TP 327
TP
Sbjct: 244 TP 245
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 PHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHIDWTPHAG 336
P +P PG Q P PGAPP +P G GM P P P + TP G
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP--PLIPTRVP-TPSNG 823
Query: 337 TTGV--RPVVDK 366
+ RP V K
Sbjct: 824 APEIPARPQVPK 835
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical
protein D2023.2 protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 103 AGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPP 231
A + ++YL GP P A+ P ++ PP I P GA P
Sbjct: 492 AQKLLNYLGEVKVNGPTTPLATDLKPAVVSPPIPYI-PAGAKP 533
>Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical
protein T05B9.1 protein.
Length = 262
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 33 SCKYDDRRPQQNMPIYLSNNDKTSRRDYI 119
+C++D+RR Q+ P ++D++S+ I
Sbjct: 224 TCRWDERRSQRTSPFSTDHSDRSSKHPRI 252
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +1
Query: 61 SKTCPYICPTTIKPAGETISYLEAGMSRGPENPH-ASPYVPGLIQPP---EKKIYPPGAP 228
+K P P T G + A P P A+P V I PP + PGAP
Sbjct: 344 AKPTPMQTPMTPSFRGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAP 403
Query: 229 PRYLP 243
P+Y P
Sbjct: 404 PQYNP 408
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 529 KLEKRVKDLSHWKREVEKAVLAITDEINVLDQDRGRLKGACRILMLPEAISRECL 693
+L +RVKDL +W E+++ + + +E + L + RL+ I + CL
Sbjct: 277 QLMQRVKDLKYWSGEIDRELADVKEEHDDLLRCYRRLQLCLDITGRSSRCNESCL 331
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
protein C25H3.8 protein.
Length = 2148
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 169 PYVPGLI-QPPEKKIYPPGAPPRYLP 243
P +P ++ QPP K+I+P P +P
Sbjct: 649 PLIPIIVPQPPSKRIFPESVPSNSIP 674
>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
protein D1044.6 protein.
Length = 1009
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +1
Query: 307 GHIDWTPHAGTTGVRPVVDKYSITRYSTGEWRKNNEYVLTPRATDKARNWETTTKKDLAN 486
GH PH T +PV ++ I + + +Y P + + + T + +L N
Sbjct: 201 GHFSLVPHTLTKSHKPVAERKQILIERYHDLMNDFDYATRPGSVESKKYANLTKRLNLCN 260
Query: 487 AF 492
F
Sbjct: 261 DF 262
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYP--PGAPPRYLPQPTDSTSGDILGMGPIGPWAP 306
GP P +P PG P P PG PP+ +P GP GP P
Sbjct: 103 GPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGP 158
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = +1
Query: 145 GPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHIDWT 324
GP P P VPGL P P +PQ +S GP+GP PG +
Sbjct: 127 GPSGPKGVPGVPGLDGVPGLDGVPGVGADDIVPQ-RESVGCFTCPQGPVGP--PGALGRP 183
Query: 325 PHAGTTGVR 351
G G R
Sbjct: 184 GPRGLPGPR 192
>AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical
protein Y39B6A.38 protein.
Length = 410
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 175 VPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWA 303
+PG +PP + P AP P+ + +G + GP+ WA
Sbjct: 137 LPGFARPP---LTEPRAPSTVAATPSPAGAGHVEADGPVKNWA 176
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 103 AGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPP 231
A + ++YL GP P A+ P ++ PP I P GA P
Sbjct: 492 AQKLLNYLGEVKVNGPTTPLATDLKPAVVSPPIPYI-PAGAKP 533
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 403 KNNEYVLTPRATDKARNWETTTKKDLANAFSGMDNKLADVNNKLEKRVKDLSHWKREVEK 582
+++ L A K + + +++ N + L D LEK KD+ + + E+E+
Sbjct: 191 ESSRATLADEAVQKLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEE 250
Query: 583 AVLAITDEI 609
+++ EI
Sbjct: 251 LKKSVSSEI 259
>AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical
protein T07D3.5 protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.7
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +1
Query: 76 YICPTTIKPAGETISYLEAGMSRGPENPHASPYV--PGLIQPPEKKIYPPGAPPRYLPQP 249
+I PT + P + GMS E A PY+ P ++ PP I PP PR+ P P
Sbjct: 143 HIPPTEVIPRSGGV----VGMSNLGEGSTAPPYLKFPPVVGPP---ISPP---PRHFPPP 192
Query: 250 TDSTSGDILGMGPIGPWAPGHIDWTP 327
G+++ IG PG P
Sbjct: 193 VIIGGGEVV----IGKPYPGDASTPP 214
>AC017117-7|AAF16620.3| 110|Caenorhabditis elegans Hypothetical
protein F43C11.10 protein.
Length = 110
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 412 EYVLTPRATDKARNWETTTKKDLANAFS--GMDNKLADVNNKLEKRVKDL 555
EY + R ++T T+K + +F+ M +L D KLEKR+K+L
Sbjct: 46 EYTRRLASVSLVREFKTKTQKKESKSFNLEQMVLELKDKVEKLEKRIKEL 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.136 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,717,779
Number of Sequences: 27780
Number of extensions: 407623
Number of successful extensions: 1755
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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