Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29b07
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    48   3e-07
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    28   0.24 
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    25   2.9  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   5.1  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         24   5.1  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   6.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   9.0  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 48.0 bits (109), Expect = 3e-07
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
 Frame = +1

Query: 235 ASSTCGLHKRQRYCIVSHLEPKQCFWCDSTNATLHNPYLNHRIQNIIYKYYPGTRVKSWW 414
           A++TCG      +C+ +    ++   CD  +A  H+P      Q +   + P     +WW
Sbjct: 65  ATNTCGDETDTDFCVQTGYSNRKS--CDVCHAGQHSP------QFLTDFHDPNN--PTWW 114

Query: 415 QSENGKENV------TIQLNMEAEFHLTHLIIQFRTFRPAAMLVERSFDFGKTWRTYRYF 576
           QSE   E V       + L +   F +T++ I F + RP +  + +       W  Y+Y+
Sbjct: 115 QSETMFEGVQYPNQVNLTLGLGKSFDITYIRIVFHSPRPESFAIYKRVTPNGPWIPYQYY 174

Query: 577 AHNC-ENFPVPHHTQ----RSLTEVVCESRYSGVSPSTEG 681
           +  C + + +P           +  +C S YS +SP  +G
Sbjct: 175 SATCRDTYGLPDSLSVMNGEDESRALCTSEYSDISPLRDG 214


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -3

Query: 109 RCHIRTAPTRSAERAEPCRGF-GSTHKTHCT 20
           +C    APT SA     C G  GS H THCT
Sbjct: 36  QCSTCNAPTDSANSVS-CAGVCGSKHHTHCT 65


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 80  ISRTRRAMPRIWLYAQ--DSLHNSAS 9
           +S  R+ +PR W++ Q  DS H S +
Sbjct: 138 LSHARKNLPRSWMFMQDNDSKHTSGT 163


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 387 SGNSSQVMVAIGKRQGKRNNSAEHGSRVSS 476
           + NSS V VAIG R        ++G+ +++
Sbjct: 56  ASNSSNVSVAIGNRVNTSTGLDDYGTNITN 85


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 110 LCTAASVIVSDPTHDSLTVPVNSVLAIQL 196
           +CT   V+V      SLTVP +S + + L
Sbjct: 193 MCTGTRVLVDGDGRVSLTVPRSSSVVLDL 221


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 513 RTKRSELYYQMREMKLCFHVQLN 445
           RTK S   Y  RE +L FH +++
Sbjct: 422 RTKESTDIYSTREPQLAFHQRIS 444


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 401 SSHGGNRKTARK 436
           S  GGNR+TARK
Sbjct: 163 SGQGGNRETARK 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,410
Number of Sequences: 2352
Number of extensions: 14462
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)