Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29b07
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 205 2e-53
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 62 5e-10
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 62 5e-10
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 54 9e-08
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 54 9e-08
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 54 9e-08
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 45 4e-05
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 45 4e-05
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 28 5.4
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 28 5.4
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 28 5.4
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 28 5.4
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF125963-4|AAD14745.2| 408|Caenorhabditis elegans F-box a prote... 28 7.1
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 28 7.1
Z83731-6|CAN86605.2| 208|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z83731-5|CAN86604.2| 223|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 205 bits (501), Expect = 2e-53
Identities = 96/178 (53%), Positives = 133/178 (74%), Gaps = 6/178 (3%)
Frame = +1
Query: 169 CELSSCYPATGNLLIGREARLFASSTCGLHKRQRYCIVSHLEPK-QCFWCDSTNA--TLH 339
C+ SCYP TGNLLIGR+++L A+STCG RQR+CIVSHLE + +CF+CDS
Sbjct: 32 CQDRSCYPITGNLLIGRKSQLKATSTCGSQGRQRFCIVSHLEEQTKCFYCDSRTEWKPQR 91
Query: 340 NPY-LNHRIQNIIYKYYPGTRVKSWWQSENGKENVTIQLNMEAEFHLTHLIIQFRTFRPA 516
PY L+HRI+N++ + ++W+QSENG +NV+I ++EAEFH THLI+ F++FRPA
Sbjct: 92 EPYRLSHRIENVVTEVMDDKN-RNWYQSENGAQNVSISFDLEAEFHFTHLIMTFKSFRPA 150
Query: 517 AMLVERSFDFGKTWRTYRYFAHNCE-NFP-VPHHTQRSLTEVVCESRYSGVSPSTEGE 684
AM++ERS DFGKTW+ YRYFA++C+ +FP +P + T+V+C S+YS V+PST GE
Sbjct: 151 AMIIERSADFGKTWQVYRYFAYDCDSSFPGIPEGPPKKHTDVICTSQYSDVAPSTGGE 208
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 61.7 bits (143), Expect = 5e-10
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Frame = +1
Query: 58 MALRVLLIVSALFGC----GSAVYSRERDRQRSDPRLTDRACELSSCYPATGNLLIGREA 225
M VL V AL+ C A +S+ R D C P N G+
Sbjct: 1 MITSVLRYVLALYFCMGIAHGAYFSQFSMRAPDHDPCHDHTGRPVRCVPEFINAAFGKP- 59
Query: 226 RLFASSTCGLHKRQRYCIVSH----LEPKQCFWCDSTNATLHNPYLNHRIQNIIYKYYPG 393
+ AS TCG ++ +YC V + +QC CD+ N +P +++
Sbjct: 60 -VIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARNHFQSHP------ASLLTDLNSI 112
Query: 394 TRVKSWWQSEN-GKENVTIQLNMEAEFHLTHLIIQFRTFRPAAMLVERSFDFGKTWRTYR 570
+ W + + +NV++ L++ +F LT++ + F + P +M + +S DFGKTW ++
Sbjct: 113 GNMTCWVSTPSLSPQNVSLTLSLGKKFELTYVSMHFCSRLPDSMALYKSADFGKTWTPFQ 172
Query: 571 YFAHNCENF----PVPHHTQRSLTEVVCESRY 654
+++ C P T+ + E VC + +
Sbjct: 173 FYSSECRRIFGRDPDVSITKSNEQEAVCTASH 204
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 61.7 bits (143), Expect = 5e-10
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Frame = +1
Query: 58 MALRVLLIVSALFGC----GSAVYSRERDRQRSDPRLTDRACELSSCYPATGNLLIGREA 225
M VL V AL+ C A +S+ R D C P N G+
Sbjct: 1 MITSVLRYVLALYFCMGIAHGAYFSQFSMRAPDHDPCHDHTGRPVRCVPEFINAAFGKP- 59
Query: 226 RLFASSTCGLHKRQRYCIVSH----LEPKQCFWCDSTNATLHNPYLNHRIQNIIYKYYPG 393
+ AS TCG ++ +YC V + +QC CD+ N +P +++
Sbjct: 60 -VIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARNHFQSHP------ASLLTDLNSI 112
Query: 394 TRVKSWWQSEN-GKENVTIQLNMEAEFHLTHLIIQFRTFRPAAMLVERSFDFGKTWRTYR 570
+ W + + +NV++ L++ +F LT++ + F + P +M + +S DFGKTW ++
Sbjct: 113 GNMTCWVSTPSLSPQNVSLTLSLGKKFELTYVSMHFCSRLPDSMALYKSADFGKTWTPFQ 172
Query: 571 YFAHNCENF----PVPHHTQRSLTEVVCESRY 654
+++ C P T+ + E VC + +
Sbjct: 173 FYSSECRRIFGRDPDVSITKSNEQEAVCTASH 204
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 54.0 bits (124), Expect = 9e-08
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Frame = +1
Query: 235 ASSTCGLHKRQRYC-IVSHLEPKQCFWCDSTNATLHNPYLNHRIQNIIYKYYPGTRVKSW 411
A+ TCG + + YC +V H+ ++ S + + H+ I Y GTR W
Sbjct: 63 ATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHKRHPIEYA-IDGTR--RW 119
Query: 412 WQS---ENGK--ENVTIQLNMEAEFHLTHLIIQF-RTFRPAAMLVERSFD--FGKTWRTY 567
WQS NG E V I +++ E+ + ++I++ + RP ++E+S D + + W+ Y
Sbjct: 120 WQSPSLANGLRFEKVNITIDLRQEYQVAYIILKMGNSPRPGTWVLEKSLDGEYYEPWQYY 179
Query: 568 RYFAHNC-ENFPVPHHTQ----RSLTEVVCESRYSGVSPSTEGE 684
C F +P T + EV C S YS ++P GE
Sbjct: 180 AMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITPLENGE 223
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 54.0 bits (124), Expect = 9e-08
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Frame = +1
Query: 235 ASSTCGLHKRQRYC-IVSHLEPKQCFWCDSTNATLHNPYLNHRIQNIIYKYYPGTRVKSW 411
A+ TCG + + YC +V H+ ++ S + + H+ I Y GTR W
Sbjct: 63 ATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHKRHPIEYA-IDGTR--RW 119
Query: 412 WQS---ENGK--ENVTIQLNMEAEFHLTHLIIQF-RTFRPAAMLVERSFD--FGKTWRTY 567
WQS NG E V I +++ E+ + ++I++ + RP ++E+S D + + W+ Y
Sbjct: 120 WQSPSLANGLRFEKVNITIDLRQEYQVAYIILKMGNSPRPGTWVLEKSLDGEYYEPWQYY 179
Query: 568 RYFAHNC-ENFPVPHHTQ----RSLTEVVCESRYSGVSPSTEGE 684
C F +P T + EV C S YS ++P GE
Sbjct: 180 AMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITPLENGE 223
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 54.0 bits (124), Expect = 9e-08
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Frame = +1
Query: 235 ASSTCGLHKRQRYC-IVSHLEPKQCFWCDSTNATLHNPYLNHRIQNIIYKYYPGTRVKSW 411
A+ TCG + + YC +V H+ ++ S + + H+ I Y GTR W
Sbjct: 63 ATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHKRHPIEYA-IDGTR--RW 119
Query: 412 WQS---ENGK--ENVTIQLNMEAEFHLTHLIIQF-RTFRPAAMLVERSFD--FGKTWRTY 567
WQS NG E V I +++ E+ + ++I++ + RP ++E+S D + + W+ Y
Sbjct: 120 WQSPSLANGLRFEKVNITIDLRQEYQVAYIILKMGNSPRPGTWVLEKSLDGEYYEPWQYY 179
Query: 568 RYFAHNC-ENFPVPHHTQ----RSLTEVVCESRYSGVSPSTEGE 684
C F +P T + EV C S YS ++P GE
Sbjct: 180 AMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITPLENGE 223
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Frame = +1
Query: 406 SWWQS---ENGKEN--VTIQLNMEAEFHLTHLIIQFRTF-RPAAMLVERSFDFGKTWRTY 567
SWW S G ++ V I +++E EFH+ ++ IQ RP + ++ERS D GKT++ +
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFHVAYVWIQMANSPRPGSWVLERSTDHGKTYQPW 182
Query: 568 RYFAHN 585
FA N
Sbjct: 183 FNFAEN 188
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Frame = +1
Query: 406 SWWQS---ENGKEN--VTIQLNMEAEFHLTHLIIQFRTF-RPAAMLVERSFDFGKTWRTY 567
SWW S G ++ V I +++E EFH+ ++ IQ RP + ++ERS D GKT++ +
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFHVAYVWIQMANSPRPGSWVLERSTDHGKTYQPW 182
Query: 568 RYFAHN 585
FA N
Sbjct: 183 FNFAEN 188
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Frame = +1
Query: 406 SWWQS---ENGKEN--VTIQLNMEAEFHLTHLIIQFRTF-RPAAMLVERSFDFGKTWRTY 567
SWW S G ++ V I +++E EFH+ ++ IQ RP + ++ERS D GKT++ +
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFHVAYVWIQMANSPRPGSWVLERSTDHGKTYQPW 182
Query: 568 RYFAHN 585
FA N
Sbjct: 183 FNFAEN 188
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Frame = +1
Query: 406 SWWQS---ENGKEN--VTIQLNMEAEFHLTHLIIQFRTF-RPAAMLVERSFDFGKTWRTY 567
SWW S G ++ V I +++E EFH+ ++ IQ RP + ++ERS D GKT++ +
Sbjct: 123 SWWMSPPLSRGLQHNEVNITIDLEQEFHVAYVWIQMANSPRPGSWVLERSTDHGKTYQPW 182
Query: 568 RYFAHN 585
FA N
Sbjct: 183 FNFAEN 188
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 20 CAVSLVRRAKSAAWLCAFC*SCRRCSDVAA 109
C L+ + W C +C CRRC+ AA
Sbjct: 592 CMKPLLDKIPQGPWRCQWCSRCRRCNHKAA 621
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 20 CAVSLVRRAKSAAWLCAFC*SCRRCSDVAA 109
C L+ + W C +C CRRC+ AA
Sbjct: 592 CMKPLLDKIPQGPWRCQWCSRCRRCNHKAA 621
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RRCSDVAALCTAASVIVSDPTHDSLTVPVNSVLAI 190
+R S+V++ T VIVS PTHD V + ++L I
Sbjct: 115 KRLSEVSSWIT--HVIVSQPTHDDRKVALTAILRI 147
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RRCSDVAALCTAASVIVSDPTHDSLTVPVNSVLAI 190
+R S+V++ T VIVS PTHD V + ++L I
Sbjct: 115 KRLSEVSSWIT--HVIVSQPTHDDRKVALTAILRI 147
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RRCSDVAALCTAASVIVSDPTHDSLTVPVNSVLAI 190
+R S+V++ T VIVS PTHD V + ++L I
Sbjct: 115 KRLSEVSSWIT--HVIVSQPTHDDRKVALTAILRI 147
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RRCSDVAALCTAASVIVSDPTHDSLTVPVNSVLAI 190
+R S+V++ T VIVS PTHD V + ++L I
Sbjct: 115 KRLSEVSSWIT--HVIVSQPTHDDRKVALTAILRI 147
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RRCSDVAALCTAASVIVSDPTHDSLTVPVNSVLAI 190
+R S+V++ T VIVS PTHD V + ++L I
Sbjct: 115 KRLSEVSSWIT--HVIVSQPTHDDRKVALTAILRI 147
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RRCSDVAALCTAASVIVSDPTHDSLTVPVNSVLAI 190
+R S+V++ T VIVS PTHD V + ++L I
Sbjct: 115 KRLSEVSSWIT--HVIVSQPTHDDRKVALTAILRI 147
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RRCSDVAALCTAASVIVSDPTHDSLTVPVNSVLAI 190
+R S+V++ T VIVS PTHD V + ++L I
Sbjct: 115 KRLSEVSSWIT--HVIVSQPTHDDRKVALTAILRI 147
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2
Query: 335 RVALVESHQKHCLGSRCETIQYR*RLCKPHVEEAKRRASRPISKLPVAG 189
RV E+ K LG + R LCKP V RA RPI+K + G
Sbjct: 598 RVEDYEAVLKQPLGLEWNMEKMRDELCKPAVVVEAGRAIRPINKKHLLG 646
>AF125963-4|AAD14745.2| 408|Caenorhabditis elegans F-box a protein
protein 214 protein.
Length = 408
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 341 LCRVALVESHQKHCLGSRCETIQYR 267
+C + E++QK C CET+ YR
Sbjct: 15 ICDTPVYEAYQKFCKVFECETMDYR 39
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 361 IQNIIYK--YYPGTR-VKSWWQSENGKENVTIQLNMEAEFHLTHLIIQFRTFRPAAMLVE 531
IQNI Y+ Y P R VK W+ + GK+ + + +A++H T ++ A ++E
Sbjct: 340 IQNIHYRAYYQPMPRFVKHWFIEKLGKKLLISRKTEQAQYHRTAQHVKQVNALSAMNILE 399
Query: 532 RSF 540
+ F
Sbjct: 400 KQF 402
>Z83731-6|CAN86605.2| 208|Caenorhabditis elegans Hypothetical
protein M04C9.1b protein.
Length = 208
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 420 GKRQGKRNNSAEHGSRVSSHAFDNTIQNVSSCCDV 524
G Q G++VS + DNT++ + C DV
Sbjct: 99 GYHQKDEKGYLPEGNKVSCESVDNTLETIIDCMDV 133
>Z83731-5|CAN86604.2| 223|Caenorhabditis elegans Hypothetical
protein M04C9.1a protein.
Length = 223
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 420 GKRQGKRNNSAEHGSRVSSHAFDNTIQNVSSCCDV 524
G Q G++VS + DNT++ + C DV
Sbjct: 114 GYHQKDEKGYLPEGNKVSCESVDNTLETIIDCMDV 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,155,764
Number of Sequences: 27780
Number of extensions: 338788
Number of successful extensions: 910
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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