Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29b02
         (473 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CBFD9 Cluster: hypothetical protein TTHERM_0040...    35   0.80 
UniRef50_Q7RI39 Cluster: Amine oxidase, flavin-containing, putat...    33   3.2  
UniRef50_Q7XNV5 Cluster: OSJNBb0015G09.11 protein; n=2; Oryza sa...    33   4.3  
UniRef50_Q54TD1 Cluster: Putative cell surface glycoprotein; n=1...    33   4.3  
UniRef50_Q2NG98 Cluster: Member of asn/thr-rich large protein fa...    33   4.3  
UniRef50_A2QIQ6 Cluster: Similarity to hypothetical protein 104H...    32   5.6  
UniRef50_Q82V75 Cluster: Putative uncharacterized protein; n=1; ...    32   7.4  
UniRef50_Q4J9N4 Cluster: Conserved protein; n=1; Sulfolobus acid...    32   7.4  
UniRef50_Q2Y978 Cluster: Putative uncharacterized protein precur...    31   9.8  

>UniRef50_UPI00006CBFD9 Cluster: hypothetical protein
           TTHERM_00409040; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00409040 - Tetrahymena
           thermophila SB210
          Length = 1362

 Score = 35.1 bits (77), Expect = 0.80
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -2

Query: 355 SVKNLSRSFYSPNVHSGNIKSNLLVTRLS--ADRCYLALCHNQLGNHLR*ISP*FAGLQN 182
           S+K +S++ Y  N  +  I+ N  + + S  +DR  L +C+N LGN L   S     ++N
Sbjct: 457 SLKIVSQTIYDKNHSAAIIELNQAIKKFSQRSDRFALGICYNNLGNILVKESRYQEAMEN 516

Query: 181 LLSSQLYFLYEL 146
            L S +   Y+L
Sbjct: 517 YLQSIIQIDYDL 528


>UniRef50_Q7RI39 Cluster: Amine oxidase, flavin-containing,
           putative; n=5; Plasmodium (Vinckeia)|Rep: Amine oxidase,
           flavin-containing, putative - Plasmodium yoelii yoelii
          Length = 1676

 Score = 33.1 bits (72), Expect = 3.2
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -2

Query: 364 NKVSVKNLSRSFYSPNVHSGNIKSNLLVTRLSADRC 257
           N +S+KN S+   SPN  SGNIK+  L T L    C
Sbjct: 607 NLISIKNGSKIKNSPNSKSGNIKTKNLTTNLDTLFC 642


>UniRef50_Q7XNV5 Cluster: OSJNBb0015G09.11 protein; n=2; Oryza
           sativa|Rep: OSJNBb0015G09.11 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 891

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 154 KENTVDLKGDSGVPQITEIFIGDGCPTGYG-RAQDNTCQLII 276
           K N+V+LKG+ G+  +T IF    CPT    R ++NT  L+I
Sbjct: 500 KPNSVNLKGNKGLCALTSIFALPICPTSPAKRKKNNTRWLLI 541


>UniRef50_Q54TD1 Cluster: Putative cell surface glycoprotein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative cell surface
           glycoprotein - Dictyostelium discoideum AX4
          Length = 1630

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 27/77 (35%), Positives = 36/77 (46%)
 Frame = +1

Query: 37  CVTVLLLINVSGIKCFNVTSPSIEGVIFNGTFNATVLTRKENTVDLKGDSGVPQITEIFI 216
           C T+    N+  IK  NV+  +I GV F  TFN    T   N V +  DS +P  T+I +
Sbjct: 434 CPTLSFNKNIPLIKTNNVSFITITGVDFGWTFNTLSPTPSSNVVTI--DSIIPN-TQIVL 490

Query: 217 GDGCPTGYGRAQDNTCQ 267
               P G G  +D   Q
Sbjct: 491 --RIPQGDGTGKDLVAQ 505


>UniRef50_Q2NG98 Cluster: Member of asn/thr-rich large protein family;
            n=2; Methanosphaera stadtmanae DSM 3091|Rep: Member of
            asn/thr-rich large protein family - Methanosphaera
            stadtmanae (strain DSM 3091)
          Length = 3356

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
 Frame = +1

Query: 25   QYALCVTVLLLINVSGIKCFNVTSPSIEGVIFNGTFNATVLTRKENTVDLK-GDSGVPQI 201
            QY   + V++ +N++  K   ++  SI+G I N     T++T  + T +    D  V + 
Sbjct: 2017 QYTYGMPVIIKVNLTDAKGNPISDASIDGTISNMEGITTIITGNDGTAEFYITDLPVSEY 2076

Query: 202  TEIFIGDGCPTGYGRAQDNTCQLIIE*PKDSTLYFQNVRLAN 327
            T      G  T Y     NT  +I E  K  T+   N  L N
Sbjct: 2077 TLTATYAGTDTKY---NGNTTDIIFEINKLGTILSINPELEN 2115


>UniRef50_A2QIQ6 Cluster: Similarity to hypothetical protein
           104H10.250 - Neurospora crassa; n=1; Aspergillus
           niger|Rep: Similarity to hypothetical protein 104H10.250
           - Neurospora crassa - Aspergillus niger
          Length = 260

 Score = 32.3 bits (70), Expect = 5.6
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -3

Query: 393 VIKESVKDSVIKFQLRIYLDLSIRQTYILEI*SRIFWLLDYQLTGVILRSAITSWATISD 214
           V+   +  SVIK    I    S+     LE+ SR+  L  Y + GVI+  ++   + ++D
Sbjct: 67  VVYSHLLRSVIKSGDVILGGWSLGGCVALEVASRLMKLPQYTVQGVIMIDSVFPTSKVTD 126

Query: 213 EYLRDLRDSRISFQV 169
            Y R + +   SFQ+
Sbjct: 127 RYPRTIAEVAASFQL 141


>UniRef50_Q82V75 Cluster: Putative uncharacterized protein; n=1;
           Nitrosomonas europaea|Rep: Putative uncharacterized
           protein - Nitrosomonas europaea
          Length = 253

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 67  SGIKCFNVTSPS-IEGVIFNGTFNATVLTRKENTVDLKGDSGVPQITEIFIGDG 225
           +GI      SP     ++ +G FN  + T  EN V + GDS   +  E+   DG
Sbjct: 67  AGIAVSKSYSPEPYTSLVLSGAFNTEIKTSSENRVIISGDSNYVESVEVNSSDG 120


>UniRef50_Q4J9N4 Cluster: Conserved protein; n=1; Sulfolobus
           acidocaldarius|Rep: Conserved protein - Sulfolobus
           acidocaldarius
          Length = 1275

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 49  LLLINVSGIKCFNVTSPSIEGVIFNGTFNATVL 147
           +LLI++SGI    ++SPS +   FN   NA +L
Sbjct: 11  ILLISISGILSLGISSPSNQNTFFNSYTNAKLL 43


>UniRef50_Q2Y978 Cluster: Putative uncharacterized protein
           precursor; n=2; Betaproteobacteria|Rep: Putative
           uncharacterized protein precursor - Nitrosospira
           multiformis (strain ATCC 25196 / NCIMB 11849)
          Length = 379

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 154 KENTVDL-KGDSGVPQITEIFIGDGCPTGY 240
           K  TVD+ KGD+G P ++  F   G P+GY
Sbjct: 176 KAGTVDVHKGDAGAPSLSGSFTDPGLPSGY 205


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,617,630
Number of Sequences: 1657284
Number of extensions: 7912958
Number of successful extensions: 20110
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20102
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)