Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29b02
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical pr...    29   1.3  
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    28   3.0  
Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p...    27   5.2  
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p...    27   5.2  
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr...    27   5.2  
U97005-11|AAB52288.1|  891|Caenorhabditis elegans Hypothetical p...    27   6.9  
AF067607-7|AAF98613.1|  433|Caenorhabditis elegans Serpentine re...    27   9.1  
AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical ...    27   9.1  
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca...    27   9.1  

>Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 354 QLRIYLDLSIRQTYILE-I*SRIFWLLDYQLTGVILRSAITSWATISDEYLRDLRD 190
           Q+ +++    R  Y +E +  R +W +D       L++    WATI  E +  L+D
Sbjct: 664 QMGVFMTAQQRSLYNIEGLTGRAWWAMDQTPYSKFLKTVERQWATIRQEGMEVLKD 719


>Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 354 QLRIYLDLSIRQTYILE-I*SRIFWLLDYQLTGVILRSAITSWATISDEYLRDLRD 190
           Q+ +++    R  Y +E +  R +W +D       L++    WATI  E +  L+D
Sbjct: 664 QMGVFMTAQQRSLYNIEGLTGRAWWAMDQTPYSKFLKTVERQWATIRQEGMEVLKD 719


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
            ZK783.1 protein.
          Length = 2585

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 226  CPTGYGRAQDNTCQLIIE*PK-DSTLYFQNVRLANR 330
            CPTG+ +A D +CQ I E  + +ST    N +  N+
Sbjct: 1478 CPTGFRKADDGSCQDIDECTEHNSTCCGANAKCVNK 1513


>Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical
           protein T05F1.4 protein.
          Length = 203

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 66  IRNKMFQRHFTINRRCDIQWHFQCHSFNS*RKYS*LERRFWSPANHGDI 212
           IR+    RH + +RR +       H FN+ R+ +    R  SP+NH  +
Sbjct: 33  IRDNQSDRHLSPDRRSNHSEDRHEHRFNNYRQQNRPNSRTPSPSNHNQV 81


>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
            protein C53B4.4e protein.
          Length = 1544

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -1

Query: 188  PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
            PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090

Query: 14   SVD 6
            S D
Sbjct: 1091 SAD 1093


>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
           protein C53B4.4d protein.
          Length = 1301

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -1

Query: 188 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
           PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810

Query: 14  SVD 6
           S D
Sbjct: 811 SAD 813


>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
           protein C53B4.4c protein.
          Length = 1304

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -1

Query: 188 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
           PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810

Query: 14  SVD 6
           S D
Sbjct: 811 SAD 813


>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
            C53B4.4b protein.
          Length = 1586

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -1

Query: 188  PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
            PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 1033 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1092

Query: 14   SVD 6
            S D
Sbjct: 1093 SAD 1095


>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
            C53B4.4a protein.
          Length = 1584

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -1

Query: 188  PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
            PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090

Query: 14   SVD 6
            S D
Sbjct: 1091 SAD 1093


>U97005-11|AAB52288.1|  891|Caenorhabditis elegans Hypothetical
           protein F19F10.10 protein.
          Length = 891

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 118 FNGTFNATVLTRKENTVDLKGDSGVPQITEIFIGDGCPTGYGRAQDNTCQLIIE*PKD 291
           F+ TF+     ++E T +   D+GV  + E  +  G P G    + + C L  E P+D
Sbjct: 577 FSATFDCVQEVKQEATEEEPSDAGVKHLMESLV-SGIPLGI--QEPSECVLEEEKPRD 631


>AF067607-7|AAF98613.1|  433|Caenorhabditis elegans Serpentine
           receptor, class t protein59 protein.
          Length = 433

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 373 RFRNKVSVKNLSRSFYSPNVHSGNIKSNLLVTRLSADRCYLALC 242
           +F      KNL ++F   NVH  NIK  L+  +++    YL LC
Sbjct: 151 KFFKNFGEKNLEKNF-GKNVHFRNIKIFLIQNKITFQTMYL-LC 192


>AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical
           protein H22D07.1 protein.
          Length = 423

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 351 LRIYLDLSIRQTYILEI*SRIFWLLDYQLTG 259
           LRI L+L+   T  L +  +I WL+ YQ  G
Sbjct: 73  LRITLNLADLMTLFLYVPKQIIWLITYQWYG 103


>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
            protein 4 protein.
          Length = 2325

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = -1

Query: 188  PESPFKSTVFSLRVKTVALKVPLNITPSIDGEVTLKHFIPDTLISNSTV 42
            PE P + ++ S+     A  V L+ TP  DG   ++ ++ +  +++S+V
Sbjct: 1054 PELPGRPSMLSIG-DISATTVQLHFTPGFDGHTAIRQWVVEGKMADSSV 1101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,985,276
Number of Sequences: 27780
Number of extensions: 199010
Number of successful extensions: 520
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)