Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29a22
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 318 3e-87
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 316 7e-87
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 308 3e-84
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 308 3e-84
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 308 3e-84
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 307 4e-84
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 213 7e-56
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 213 7e-56
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 143 1e-34
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 143 1e-34
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 141 5e-34
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 141 5e-34
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 139 1e-33
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 136 1e-32
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 136 1e-32
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 134 5e-32
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 133 1e-31
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 133 1e-31
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 133 1e-31
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 131 5e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 130 7e-31
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 114 6e-26
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 114 6e-26
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 112 2e-25
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 29 2.2
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 29 2.2
AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical ... 29 2.2
AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical... 29 3.0
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 318 bits (780), Expect = 3e-87
Identities = 147/174 (84%), Positives = 152/174 (87%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MREIVHIQ GQCGNQIGAKFWEVISDEHGIDPTG Y+GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
RKEAE CDCLQGFQ ISKIREEYPDRIM TFSVVPSPK
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPK 174
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 316 bits (777), Expect = 7e-87
Identities = 145/174 (83%), Positives = 152/174 (87%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MREIVH+Q GQCGNQIGAKFWEVISDEHGI P GTY G+SDLQLERINVYYNEA GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
RKEAEGCDCLQGFQ ISKIREEYPDRIM++FSVVPSPK
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPK 174
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 308 bits (755), Expect = 3e-84
Identities = 139/174 (79%), Positives = 151/174 (86%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MREIVH+Q GQCGNQIG+KFWEVISDEHGI P GT+ G++DLQLERI+VYYNEA GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
RKEAEGCDCLQGFQ ISKIREEYPDRIM++FSVVPSPK
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPK 174
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 308 bits (755), Expect = 3e-84
Identities = 143/174 (82%), Positives = 149/174 (85%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MREIVHIQ GQCGNQIG+KFWEVISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
RKEAE DCLQGFQ ISKIREEYPDRIMNTFSVVPSPK
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPK 174
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 308 bits (755), Expect = 3e-84
Identities = 143/174 (82%), Positives = 149/174 (85%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MREIVHIQ GQCGNQIG+KFWEVISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
RKEAE DCLQGFQ ISKIREEYPDRIMNTFSVVPSPK
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPK 174
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 307 bits (754), Expect = 4e-84
Identities = 139/174 (79%), Positives = 151/174 (86%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MREIVH+Q GQCGNQIG+KFWEVISDEHGI P GT+ G+SDLQLERI+VYYNEA GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
RKEAEGCDCLQGFQ ISKIREE+PDRIM++FSVVPSPK
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPK 174
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 213 bits (521), Expect = 7e-56
Identities = 96/174 (55%), Positives = 126/174 (72%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ GTY GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+EAE D L+GFQ ISK+REEY D+ ++T S++PS K
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 213 bits (521), Expect = 7e-56
Identities = 96/174 (55%), Positives = 126/174 (72%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ GTY GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+EAE D L+GFQ ISK+REEY D+ ++T S++PS K
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 65/174 (37%), Positives = 98/174 (56%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MRE++ I GQ G QIG WE+ EHGI P GT D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 65/174 (37%), Positives = 98/174 (56%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MRE++ I GQ G QIG WE+ EHGI P GT D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 141 bits (341), Expect = 5e-34
Identities = 65/174 (37%), Positives = 99/174 (56%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MRE++ I GQ G QIG WE+ EHGI P GT S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 141 bits (341), Expect = 5e-34
Identities = 65/174 (37%), Positives = 99/174 (56%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MRE++ I GQ G QIG WE+ EHGI P GT S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 140 bits (338), Expect = 1e-33
Identities = 70/176 (39%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE--RINVYYNEATGGK 317
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 318 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 497
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 498 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
VR+ E C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQ 176
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 139 bits (337), Expect = 1e-33
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Frame = +3
Query: 147 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTY-HGDSDLQLERINVYYNEATGGKYV 323
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
RK+ E C+ LQGF + ++ E+ + FSV P+P+
Sbjct: 126 RKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQ 179
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 136 bits (330), Expect = 1e-32
Identities = 62/174 (35%), Positives = 97/174 (55%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MRE++ I GQ G QIG WE+ EHGI P GT + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 136 bits (330), Expect = 1e-32
Identities = 62/174 (35%), Positives = 97/174 (55%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MRE++ I GQ G QIG WE+ EHGI P GT + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 174
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 134 bits (324), Expect = 5e-32
Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 3/179 (1%)
Frame = +3
Query: 138 KEMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL---QLERINVYYNEAT 308
K RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E
Sbjct: 5 KGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETA 63
Query: 309 GGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 488
GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D
Sbjct: 64 GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDV 123
Query: 489 VLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
V+D V++ AE C+ LQGF + ++ EY + F++ P+P+
Sbjct: 124 VMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQ 182
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 133 bits (321), Expect = 1e-31
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 317
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 318 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 497
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 498 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
+R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQ 176
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 133 bits (321), Expect = 1e-31
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 317
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 318 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 497
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 498 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
+R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQ 176
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 133 bits (321), Expect = 1e-31
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 317
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 318 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 497
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 498 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
+R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQ 176
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 131 bits (316), Expect = 5e-31
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Frame = +3
Query: 147 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 320
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 321 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 500
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 501 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
+R+ A+ C LQGF + ++ +Y + FS+ P+P+
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQ 175
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 130 bits (315), Expect = 7e-31
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Frame = +3
Query: 147 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE--RINVYYNEATGGKY 320
RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 321 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 500
VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDR 126
Query: 501 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
VR+ E C LQGF + ++ +Y + F + P+P+
Sbjct: 127 VRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQ 181
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 130 bits (313), Expect = 1e-30
Identities = 62/174 (35%), Positives = 98/174 (56%)
Frame = +3
Query: 144 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 323
MRE++ I GQ G QIG WE+ EHGI P GT + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 324 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 503
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 504 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
R+ A C+ LQGF + ++ EY + FS+ P+P+
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQ 173
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 114 bits (274), Expect = 6e-26
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Frame = +3
Query: 156 VHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAI 335
VH+ GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+
Sbjct: 10 VHV--GQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAV 66
Query: 336 LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVR 506
LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 507 KEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSV 650
+EAE + L G + ++RE +P +++ T+SV
Sbjct: 126 REAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSV 173
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 114 bits (274), Expect = 6e-26
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Frame = +3
Query: 156 VHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAI 335
VH+ GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+
Sbjct: 10 VHV--GQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAV 66
Query: 336 LVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVR 506
LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 507 KEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSV 650
+EAE + L G + ++RE +P +++ T+SV
Sbjct: 126 REAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSV 173
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 112 bits (270), Expect = 2e-25
Identities = 55/151 (36%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Frame = +3
Query: 222 EHGIDPTGTYHGDSDL---QLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQ 392
EHGI P G YH + D + E IN ++ E GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 393 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXX 572
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGT 123
Query: 573 XXXXXXXXISKIREEYPDRIMNTFSVVPSPK 665
+ ++ EY + F++ P+P+
Sbjct: 124 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQ 154
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/70 (37%), Positives = 32/70 (45%)
Frame = +1
Query: 259 TPTSSWSASTCTITRRLEESTCLGLSLWT*SPGQWTLYAPDHSVRSSVRTTLSLGNRVLA 438
TPT+S S ST T T ST T + + AP +VR+S TT R
Sbjct: 532 TPTTSTSTSTSTSTPSTTTSTTS-----TSTTSSTSSSAPIRAVRTSTPTT----RRTTT 582
Query: 439 TTGLRVTTPK 468
TT R TTP+
Sbjct: 583 TTPRRTTTPR 592
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 157 FISKEVNAETRLGLSSGKLYPMSMASIRPERITETPTSSWSASTCTITRRLEE 315
F +K V AE R+ + S L R ERI SW + I +R E+
Sbjct: 458 FSNKAVTAEERIQIQSETLCEAKKNEAREERIRRNERDSWKDARKHIEQRYEQ 510
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 157 FISKEVNAETRLGLSSGKLYPMSMASIRPERITETPTSSWSASTCTITRRLEE 315
F +K V AE R+ + S L R ERI SW + I +R E+
Sbjct: 458 FSNKAVTAEERIQIQSETLCEAKKNEAREERIRRNERDSWKDARKHIEQRYEQ 510
>AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical
protein C30F12.1 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 187 RLGLSSGKLYPMSMASIR--PERITETPTSSWSASTCTITRRLEESTCLGLSLWT*SPGQ 360
++GL GK + R PE I + SS SAS+ + R + +S + S S
Sbjct: 156 KMGLPGGKPENSGKSGSRNSPEPIMTSSASSSSASSSSSHRPIRQSVSIATSSPATSSST 215
Query: 361 WTLYAPDHSVRSSV 402
+ Y PD S+R+ V
Sbjct: 216 PSKYNPDPSLRAVV 229
>AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical
protein C15F1.2 protein.
Length = 801
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 241 PERITETPTSSWSAS--TCTITRRLEESTCLGLSLW 342
P+ + P+S++ A+ C LEE CLG SLW
Sbjct: 22 PDPSSPAPSSNYCAAFVECAAVSLLEERLCLGNSLW 57
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 447 AKGHYTEGAELVDSVLDVVRKEAEGCDCLQ 536
++G Y + E +++ LDV+ KE G C +
Sbjct: 407 SQGDYPKAIECIETSLDVLSKELNGVTCFR 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,753,417
Number of Sequences: 27780
Number of extensions: 302976
Number of successful extensions: 924
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -