Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29a19
         (578 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5Z3G0 Cluster: Putative polyketide synthase; n=1; Noca...    34   2.1  
UniRef50_Q0S2I0 Cluster: Possible glucose dehydrogenase; n=3; No...    34   2.8  
UniRef50_A4JDZ9 Cluster: Membrane protein-like protein; n=2; Bur...    34   2.8  
UniRef50_Q82JP5 Cluster: Putative glycosyl hydrolase; n=1; Strep...    33   3.7  
UniRef50_Q0TWE7 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   3.7  

>UniRef50_Q5Z3G0 Cluster: Putative polyketide synthase; n=1; Nocardia
            farcinica|Rep: Putative polyketide synthase - Nocardia
            farcinica
          Length = 1737

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 354  PTALYNATATALSANVTLGCDIAYSSLPAAGRFNCTV-PGNGTALAEV 214
            P  L  A A  + A+VT+G  +A+ ++PAAG    T+ P  G A  +V
Sbjct: 1117 PAELVRAAAAQVLADVTVGASLAHGAVPAAGTLTTTLTPHPGGASVQV 1164


>UniRef50_Q0S2I0 Cluster: Possible glucose dehydrogenase; n=3;
           Nocardiaceae|Rep: Possible glucose dehydrogenase -
           Rhodococcus sp. (strain RHA1)
          Length = 382

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -1

Query: 269 PPDASTVPSPGTGPRWPKSPRDSSDATTCPDALKVLVLCSGRAS*MVIQR*TG 111
           PP ++T   P +GP  P    D S   TC D    LV+    A+ +V +R TG
Sbjct: 57  PPPSTTTTPPPSGPLGPCQDPDPSVIATCLDTTGGLVVLPDGATALVAERRTG 109


>UniRef50_A4JDZ9 Cluster: Membrane protein-like protein; n=2;
           Burkholderia cepacia complex|Rep: Membrane protein-like
           protein - Burkholderia vietnamiensis (strain G4 / LMG
           22486) (Burkholderiacepacia (strain R1808))
          Length = 706

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
 Frame = -3

Query: 471 NVGHLSCYTRPSS---KVFLFLENSTLISLTWGSVIFPVGDAPTALYNATATALSANVTL 301
           N G   C T  S+    VFL +  S L + + GS++FP G  P    +  AT L+A V L
Sbjct: 372 NCGTSDCVTNTSTAQGNVFLNMSISLLSTCSNGSLVFPGGTCP----SGKATPLAA-VQL 426

Query: 300 GCDIAYSSLPAAGRFNCTVPGNGTALAEV 214
               AY +   AG  + T   NGT  A V
Sbjct: 427 PV-TAYVAPATAGLASVTCSANGTKSATV 454


>UniRef50_Q82JP5 Cluster: Putative glycosyl hydrolase; n=1;
           Streptomyces avermitilis|Rep: Putative glycosyl
           hydrolase - Streptomyces avermitilis
          Length = 647

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 21/83 (25%), Positives = 40/83 (48%)
 Frame = -3

Query: 477 FINVGHLSCYTRPSSKVFLFLENSTLISLTWGSVIFPVGDAPTALYNATATALSANVTLG 298
           +  +GHL+ + RP ++      ++++ ++ W +   P G      YN  +TA +  +  G
Sbjct: 437 YYTMGHLTKFVRPGAQRVASTASASVPNVAWRN---PDGSKALIAYNDASTAKTVTLNWG 493

Query: 297 CDIAYSSLPAAGRFNCTVPGNGT 229
              A  SLP  G+ + T   +GT
Sbjct: 494 SQHATYSLP--GKTSATFTWSGT 514


>UniRef50_Q0TWE7 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 218

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 275 CRPPDASTVPSPGTGPRWPKSPRDSSDATTCPDAL 171
           C PP A T P+  T P  P +P DS+ A T   ++
Sbjct: 88  CPPPTAPTAPTAPTAPTAPTAPTDSTTAPTAGSSI 122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,607,315
Number of Sequences: 1657284
Number of extensions: 10068187
Number of successful extensions: 32652
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32613
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)