Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29a15
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 31 0.86
11_06_0710 - 26492093-26493460 30 1.5
05_04_0158 + 18613265-18615304 30 1.5
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 30 2.0
01_01_0165 - 1410137-1410924,1411774-1411933 30 2.0
11_01_0398 - 3008074-3008428,3009775-3009926,3010070-3011368 29 2.6
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 29 2.6
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 29 2.6
01_07_0366 + 43088835-43089099,43089311-43089876 29 2.6
09_01_0019 + 403078-404211 29 3.5
10_08_0023 - 14232878-14233651,14235321-14235623 29 4.6
06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 29 4.6
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768... 29 4.6
12_02_0332 + 17653413-17653581,17654045-17654139,17654292-176544... 28 6.1
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 28 6.1
01_05_0189 + 19075411-19075497,19075603-19075682,19076707-190768... 28 6.1
01_01_0012 + 71903-72935,73468-73981,74619-76008 28 6.1
11_06_0291 + 22008412-22012284 28 8.0
09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154... 28 8.0
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 404 RRVFRSGITHEEWTVSWDGVNDDEDKLSDIDELRSGKIKSQKQNKNTDAANDS-DEEPAD 580
RR RSG + E W+ D D + SD D+ K+ S++Q + D DS E AD
Sbjct: 405 RRSDRSGASRETWSSRDDERRDSRGRRSDGDD---RKVNSREQRADHDDRRDSARERRAD 461
Query: 581 KKARAGKT 604
+ G++
Sbjct: 462 RDESNGES 469
>11_06_0710 - 26492093-26493460
Length = 455
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 455 DGVNDDEDKLSDIDELRSGKIKSQKQNKNTDAANDSDEEPADKKARAGKTKED 613
D + + + +D E S K K +K+ K+ ++D D++ A+KK++ D
Sbjct: 116 DSIAEPVEDGTDDGEDESEKKKKKKKKKSKSKSSDDDDDDAEKKSKKKSKNSD 168
>05_04_0158 + 18613265-18615304
Length = 679
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 503 RSGKIKSQKQNKNTDAANDSDEEPADKKARAGKTKEDA 616
++G IK + + + A + +E +++ +AGKTK DA
Sbjct: 552 KAGNIKQELVKEQQEKAGNIKQESGEEQEKAGKTKHDA 589
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Frame = +2
Query: 380 NKDVENNCRRVFRSGITHEEWTVSWDGVN-DDEDKLSDIDELRSGKIK-------SQKQN 535
N VE + G T + S VN DD+D SD D+ + S + +
Sbjct: 24 NGKVEGKENEQKKQGKTDSSASKSKAAVNDDDDDDDSDEDDSEDEDLSPEDDDDDSSEDD 83
Query: 536 KNTDAANDSDEEPADKKARAGKTK 607
+ D ++SDEE KK GK K
Sbjct: 84 SSEDDEDESDEEDTPKKPETGKRK 107
>01_01_0165 - 1410137-1410924,1411774-1411933
Length = 315
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 404 RRVFRSGITHEEWTVSWDGVNDDEDKLSDID-ELRSGKIKSQ-KQNKNTDAANDSDE 568
R+ ++ + E+ W G D++++ +D E K+K Q K+N N A+DSDE
Sbjct: 79 RKAWQENVDEEDCL--WTGSEDEDEEENDTKMEREIKKVKKQAKENANLIDADDSDE 133
>11_01_0398 - 3008074-3008428,3009775-3009926,3010070-3011368
Length = 601
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 473 EDKLSDIDELRSGKIKSQKQNKNTDAANDSDEEPA 577
ED+ + ID+L I +++ KN DA S PA
Sbjct: 473 EDRDTIIDQLNRADISDREEQKNQDAGGSSTRSPA 507
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 3/124 (2%)
Frame = +2
Query: 233 GPLIVKYQGKERVIGV-ISACKIDPKS--HSCHGPFLYTSVFKNRQFLSCAINKDVENNC 403
GP +KYQ + + CK K HS G + T + Q + N V+
Sbjct: 7 GPEPLKYQTLALKVSIHCEGCKKKVKKVLHSIEGVYK-TDIDVQHQKVVVIGNVSVDTLV 65
Query: 404 RRVFRSGITHEEWTVSWDGVNDDEDKLSDIDELRSGKIKSQKQNKNTDAANDSDEEPADK 583
+++ ++G E W + GK K + +NKN + AN EPA
Sbjct: 66 KKLVKTGKHAEPWPEPAPPPPAAAAAANSPGGGGGGKKKKKNKNKNKNPANGQPGEPAPP 125
Query: 584 KARA 595
A A
Sbjct: 126 AATA 129
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/84 (21%), Positives = 41/84 (48%)
Frame = +2
Query: 362 FLSCAINKDVENNCRRVFRSGITHEEWTVSWDGVNDDEDKLSDIDELRSGKIKSQKQNKN 541
F S + KD V R G + E WT W +D+E+K + +E+ +++ +++ +
Sbjct: 16 FQSVELEKD--RAALAVRRCGWSREGWT-RWTA-SDEEEKEEEEEEVEEEEVEEEEEIEE 71
Query: 542 TDAANDSDEEPADKKARAGKTKED 613
+ + +EE + + + +E+
Sbjct: 72 EEVEEEIEEEEEEIEEEEEEVREE 95
>01_07_0366 + 43088835-43089099,43089311-43089876
Length = 276
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 458 GVNDDEDKLSDIDELRSGKIKSQKQNKNTDAANDSDEEPADKKARAGKTKEDAS 619
G D+E K LR K+K QKQ ++ D ND+D++ D+ + + + +++
Sbjct: 142 GRTDNEIKNYWRTHLRKLKLKQQKQQQSDDHHNDNDDDD-DRNSSSSSSSSNSN 194
>09_01_0019 + 403078-404211
Length = 377
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 467 DDEDKLSDIDELRSGKIKSQKQNKNTDAANDSDEEPA-DKKARAGKTKEDAS 619
D+E K S G+ K ++ K +D +D +EE + DKK ++ + + + S
Sbjct: 212 DEEKKTSRHRSSSRGRSKHRRSTKRSDTEDDLEEERSKDKKKKSRRKRHERS 263
>10_08_0023 - 14232878-14233651,14235321-14235623
Length = 358
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +2
Query: 410 VFRSGITHEEWTVSWDGVNDDEDKLSDIDELRSGKIKSQKQNKNTDAANDSDEEPADKKA 589
+F SG+ +E +S G+ + E+ +I +L GK+ ++QN+ A D+ A+
Sbjct: 267 LFDSGVLNE---LSEPGIPELENLAVNIQDLGKGKVDEERQNQTNGQAELGDDFWAELLV 323
Query: 590 RAGKTKEDAS 619
KE+ S
Sbjct: 324 EDFTGKEEQS 333
>06_01_0469 +
3322886-3323564,3324033-3324953,3325025-3325155,
3325237-3325317,3328173-3328820
Length = 819
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 380 NKDVENNCRRVFRSGITHEEWTVSWDGVNDDEDKLSDIDELRSGKIKSQKQ-NKNTDAAN 556
N+ + C + +S E + WD + E L E+RS + ++ K +K
Sbjct: 466 NRATQYACSLIAKSQELDESRKIFWDTLETGEKALDVFFEIRSLRSQAAKDVSKRDKKKK 525
Query: 557 DSDEEPADKKAR 592
S + P+ KKA+
Sbjct: 526 KSSKGPSTKKAK 537
>02_04_0480 -
23274945-23275196,23275558-23275623,23276709-23276851,
23276947-23277063,23277219-23278683,23279561-23280730
Length = 1070
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 464 ND-DEDKLSDIDELRSGKIKSQKQNKNTD----AANDSDEEPADKKAR 592
ND DE+K D++R G + +K+ D + ND+DEE +K +
Sbjct: 121 NDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRK 168
>12_02_0332 +
17653413-17653581,17654045-17654139,17654292-17654444,
17655013-17655117,17655197-17655268,17655514-17655626,
17655727-17655861,17655970-17656038,17656154-17656241,
17656348-17656419,17656505-17656605,17656724-17656841,
17656933-17656992,17657593-17657703,17659044-17659154
Length = 523
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 479 KLSDIDELRSGK--IKSQKQNKNTDAANDSDEEP 574
+++ ID L S K +KS+K K TD N+ EEP
Sbjct: 233 RVTRIDRLFSKKPQVKSKKDTKKTDEINEDLEEP 266
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 28.3 bits (60), Expect = 6.1
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 341 SVFKNRQFLSCAINKDVENNCRRVFRSGITHEEWTVSWDGVNDDEDKLSDIDELRSGKIK 520
SV +N+ L+C +KD++N + + D ++ + DE++S
Sbjct: 340 SVPENKDALNC--DKDLDNCGSKDLDKELLENSQDNLEDKAQSSDNPNNAADEIQSPP-- 395
Query: 521 SQKQNKNTDAANDSDEEPADKKARAGKT-KEDASV 622
S ++TD + DEE DK+ A T K+D +V
Sbjct: 396 SSSPTESTDDISSEDEEYNDKENIAPSTPKDDVNV 430
>01_05_0189 +
19075411-19075497,19075603-19075682,19076707-19076851,
19077259-19078116,19078664-19078724,19082571-19082680
Length = 446
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +2
Query: 383 KDVENNCRRVFRSGITHEEWTVSWDGVNDDEDKLSDIDELRSGKIKSQKQNKNT 544
K E + R + + SWDG+N + SD D S ++ + + T
Sbjct: 137 KSTEYYIEKFLRGNLKYSMGLFSWDGLNIYQGSRSDADRFPSERLSNSSNGRPT 190
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 503 RSGKIKSQKQNKNTDAANDSDEEPADKKARAGK 601
R + +SQ++N+N+D + E DKK R+ +
Sbjct: 667 RRSRSRSQEKNRNSDKKDSKKSEMEDKKRRSDR 699
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 458 GVNDDEDKLSDIDELRSGKIKSQKQNKNTDAANDSDEEPADKKARAGKTKED 613
G N +E D D GK +++K D + +EE DK+ + KE+
Sbjct: 408 GENKEEKDKGDGDR-EEGKEENEKDKGEADGEGEQEEEMKDKEKGGEERKEE 458
>09_04_0475 -
17913982-17914772,17914830-17915156,17915323-17915493,
17915583-17915824,17915862-17916049,17916184-17916253,
17916329-17916612
Length = 690
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 QGKERVIGVISACKIDPKSHSCHGP-FLYTSVFKNRQFLSCAINKDVENN 400
+G VIG +S C PK+ SC G V + +L NKD ++
Sbjct: 115 RGVSYVIGCLSTCSDQPKNGSCSGAGCCSVDVPPDLGYLEAYFNKDYNSS 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,896,073
Number of Sequences: 37544
Number of extensions: 298094
Number of successful extensions: 880
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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