Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29a08
         (641 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB128 Cluster: cyclic nucleotide-binding domain...    36   0.83 
UniRef50_Q5CYS9 Cluster: Putative uncharacterized protein; n=2; ...    35   1.9  
UniRef50_A6SKF5 Cluster: Putative uncharacterized protein; n=2; ...    33   5.9  
UniRef50_A5FLQ2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  
UniRef50_Q6VT82 Cluster: Cytochrome P450 CYP330A1; n=1; Carcinus...    33   7.7  

>UniRef50_UPI00006CB128 Cluster: cyclic nucleotide-binding domain
            containing protein; n=1; Tetrahymena thermophila
            SB210|Rep: cyclic nucleotide-binding domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1097

 Score = 35.9 bits (79), Expect = 0.83
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = +2

Query: 176  EIINLVEQFS*NKS*SKETLTLFRSFVCIKQVVKDITDRQENYYSSKSNPKHF*EHHPKS 355
            +I N + QF    +  ++TLT        K   KD+   Q+ YYSS+ N +   +HH K 
Sbjct: 819  DISNQLNQFIQQPNLQEDTLTA-------KVSQKDLKLIQDQYYSSEQNKQEIKQHHQKQ 871

Query: 356  LARLRVVVSNTQQWKHRLR*MLH-RLTDIEFNPNSLNPV 469
             +       N  + K+++  + + +L D+    NSL+P+
Sbjct: 872  HSLTTSNFQNNNEAKNKINQLENQKLEDVLQQKNSLDPL 910


>UniRef50_Q5CYS9 Cluster: Putative uncharacterized protein; n=2;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum Iowa II
          Length = 1396

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = +2

Query: 416  MLHRLTDIEFNPNSLNPVGR*AVALIKFSILDKLYEFIVF*QILSYLPIDLCYSPILF*V 595
            ++H L D  F P SL+ +    ++L  +  LD  +      ++LS  P+DL    ILF  
Sbjct: 960  LIHSLQDF-FTPPSLSSIENSLLSLRNYGALDDQFRITPLGELLSRWPVDLSIG-ILFIY 1017

Query: 596  GISFCCL 616
            G+ F C+
Sbjct: 1018 GLIFDCI 1024


>UniRef50_A6SKF5 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 676

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +3

Query: 315 NPIQNTSENTTPSLWLGFESSLATLNSGNIVYVKCYIGLLTSSL 446
           +P Q+ S NTTPSL +G  SS+A  ++G   Y +  I +L +S+
Sbjct: 16  DPRQSRSRNTTPSL-VGTASSVAPSDAGKTPYTQIPISILRTSV 58


>UniRef50_A5FLQ2 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 128

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 239 LFRSFVCIKQVVKDITDRQENYYSSKSNPKHF*E 340
           ++  F C +  +KDIT R   ++S K + KHF E
Sbjct: 10  VYDDFFCFRYTIKDITYRSGIFFSEKCSDKHFAE 43


>UniRef50_Q6VT82 Cluster: Cytochrome P450 CYP330A1; n=1; Carcinus
           maenas|Rep: Cytochrome P450 CYP330A1 - Carcinus maenas
           (Common shore crab) (Green crab)
          Length = 502

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +2

Query: 284 TDRQENYYSSKSNPKHF*EHHPKSLARLRVVVSNTQQWKHRLR*MLHRLTDIEFNPNSLN 463
           TDR E ++S+  N         +S A + V+ S+ Q W+ + R MLH L D+ F  +S  
Sbjct: 104 TDRPEVFFSTHRNRIMT---DGRSTA-IGVIGSSGQVWQEQRRFMLHHLRDLGFGKSSYE 159

Query: 464 PV 469
           PV
Sbjct: 160 PV 161


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,244,200
Number of Sequences: 1657284
Number of extensions: 11693388
Number of successful extensions: 26341
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26336
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)