Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29a08
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   3.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   3.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = -3

Query: 567 KSIGK-YESICQNTMNSY--NLSNIENLIKATAYLPTGFNEF 451
           + +G+ + + C+    S+  +LSNIE+ +    ++ TGF+ +
Sbjct: 302 RELGRIFRAYCRENHASWVNHLSNIEDCLNYVPHISTGFSPY 343


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 103 FFNLAAGCFKQLQHWRNSELGLE-CGNNKSCRTIF 204
           FFNLA    + ++ W   E+ L+   N+KS +  F
Sbjct: 278 FFNLAKSWPQLIEKWSRVEMALDNWKNDKSLKRKF 312


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 294 CRSVISFTTCFM 259
           C +VIS T CFM
Sbjct: 161 CNTVISATVCFM 172


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 294 CRSVISFTTCFM 259
           C +VIS T CFM
Sbjct: 157 CNTVISATVCFM 168


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 561 IGKYESICQNTMNSYNLSNIENLIKATA 478
           I K +S C+  + +Y+L  I + +  TA
Sbjct: 310 IKKADSFCKKKLENYSLQLINHRVVFTA 337


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 397 PLLSVANDDSKPSQRLGVVFSEV 329
           PLL    DD K  QR G   +++
Sbjct: 231 PLLFTYTDDGKNQQRTGTELTKM 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,521
Number of Sequences: 336
Number of extensions: 3401
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)