Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29a07
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.35 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
 Frame = -2

Query: 218 VSLTVMTATAFIIFSKYFEI*I*F------FVVNHNFCVHYH*FSYFTLLRDYY 75
           VS+T      F++ S YF + + F      F V+   C +Y  +++  LL  YY
Sbjct: 62  VSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYY 115


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 358 KNISVPFQSFLVHQVL 311
           KN S PFQ  LVH +L
Sbjct: 133 KNTSHPFQRVLVHDIL 148


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 500 FFKLSRVKATDILGISLCITTFVASGVTSLGLRPVPPVV 384
           FF+L+R     ILG+S  + TF+   V       + PVV
Sbjct: 311 FFELNR---RTILGVSNAVITFLIVMVQKASYEKLSPVV 346


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 16/74 (21%), Positives = 33/74 (44%)
 Frame = +1

Query: 136 LTTKNYI*ISKYFEKMIKAVAVITVSDTCFKDNSKDESGPALCHLVKKLFPDSNLHTIIV 315
           L  K+ + IS   +  I  VA+  +   C    S+ +    LC+ + + FP+ +     +
Sbjct: 267 LYLKHKLEISSLVQTAITLVAMCGLVLICDSAKSESQQTVFLCYKLMEKFPERSHEQQEL 326

Query: 316 PDEREMIERELKYF 357
               ++IE+ +  F
Sbjct: 327 YMAAQVIEKSVANF 340


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 405 KPKGCHSRGYKSCYTQRNSQY 467
           +P   + R Y   +TQ+ +QY
Sbjct: 209 RPDSIYQREYSPTFTQQQTQY 229


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 319 QVLLLCVNWSQEIIF*LNGKVLDQIHL 239
           Q+L+  VNW   +I  +    L+ I L
Sbjct: 84  QILIFLVNWYPRLIIGIMNSTLNLIFL 110


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 293 ESGNNFLTKWQSAGPDS 243
           E GN     ++S GPDS
Sbjct: 353 EQGNKLADLYKSLGPDS 369


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 293 ESGNNFLTKWQSAGPDS 243
           E GN     ++S GPDS
Sbjct: 245 EQGNKLADLYKSLGPDS 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,146
Number of Sequences: 336
Number of extensions: 3056
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)