Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29a07
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64852-8|AAB04971.3| 168|Caenorhabditis elegans Molybdenum cofa... 95 3e-20
AC024869-2|AAK68603.2| 542|Caenorhabditis elegans Hypothetical ... 30 1.9
U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical p... 28 5.7
Z92830-10|CAB07363.1| 315|Caenorhabditis elegans Hypothetical p... 28 7.5
D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein. 28 7.5
D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein. 28 7.5
D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein. 28 7.5
AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa (tetradec... 28 7.5
AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa (tetradec... 28 7.5
>U64852-8|AAB04971.3| 168|Caenorhabditis elegans Molybdenum
cofactor biosynthesisprotein 2 protein.
Length = 168
Score = 95.5 bits (227), Expect = 3e-20
Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 193 VAVITVSDTCFKDNSKDESGPALCHLVK-KLFPDSNLHT---IIVPDEREMIERELKYFC 360
V VITVSDTC DESGP L LV ++ ++ +VPD+ I L
Sbjct: 3 VCVITVSDTCSAGTRTDESGPKLVELVDTSAVVNATVNEGSPFVVPDDVTAIHDALVEQ- 61
Query: 361 DSNLDXXXXXXXXXXSPRDVTPEATKVVIHKEIPSISVALTLESLKKTPMAMLSRSVAGL 540
D +PRDVTPEAT VI + + +AL SLK T MA LSR++ G+
Sbjct: 62 SKFADVILTTGGTGFAPRDVTPEATLKVIDRRCSGLEIALHTASLKITSMAALSRAIVGI 121
Query: 541 RDKTLIVNLPGSKKAVLECFEVIQ 612
R TLIVN+PGS KAV EC++ ++
Sbjct: 122 RGGTLIVNMPGSVKAVKECWDTLE 145
>AC024869-2|AAK68603.2| 542|Caenorhabditis elegans Hypothetical
protein Y75B7AL.1 protein.
Length = 542
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 435 KSCYTQRNSQYICSLNSGELKKNSYGYAFKICSRI 539
KSC+ + ++ + +L+ L+ N Y +++CSR+
Sbjct: 206 KSCFNRDTNETLVTLSPTRLRTNPYFTVYRVCSRM 240
>U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical
protein T19H12.2 protein.
Length = 225
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 229 DNSKDESGPALCHLVKKLFPDSNLHTIIVPDEREMIERELKYFCDSNLD 375
+ DE GP L +L K F D +VP+ + R K ++ D
Sbjct: 168 EGDSDEDGPGLSYLNKSQFSDDETDDYVVPEAGDAETRGAKRAASADCD 216
>Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical
protein ZC455.5a protein.
Length = 535
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 265 HLVKKLFPDSNLHTIIVPDEREMIERELKYFC 360
H+ +K+F DS LH I+ + +++ E FC
Sbjct: 123 HMCRKIFQDSELHKILKDKDFDVVIAETFDFC 154
>Z92830-10|CAB07363.1| 315|Caenorhabditis elegans Hypothetical
protein F11A5.12 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 228 FETGVTHSDDCYCFYHFLKILRNL 157
F TGV + Y FYHF++I+ N+
Sbjct: 6 FATGVGAAVVLYIFYHFIRIILNI 29
>D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein.
Length = 567
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 477 GYRYTGNFFVYNNFCSLWSDIPW 409
G+++ FF +FCSL SD W
Sbjct: 28 GHQFVATFFRQPHFCSLCSDFMW 50
>D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein.
Length = 704
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 477 GYRYTGNFFVYNNFCSLWSDIPW 409
G+++ FF +FCSL SD W
Sbjct: 165 GHQFVATFFRQPHFCSLCSDFMW 187
>D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein.
Length = 557
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 477 GYRYTGNFFVYNNFCSLWSDIPW 409
G+++ FF +FCSL SD W
Sbjct: 18 GHQFVATFFRQPHFCSLCSDFMW 40
>AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform b protein.
Length = 567
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 477 GYRYTGNFFVYNNFCSLWSDIPW 409
G+++ FF +FCSL SD W
Sbjct: 28 GHQFVATFFRQPHFCSLCSDFMW 50
>AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform a protein.
Length = 704
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 477 GYRYTGNFFVYNNFCSLWSDIPW 409
G+++ FF +FCSL SD W
Sbjct: 165 GHQFVATFFRQPHFCSLCSDFMW 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,417
Number of Sequences: 27780
Number of extensions: 275729
Number of successful extensions: 601
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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