Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29a05
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060687-1|AAL28235.1|  260|Drosophila melanogaster GH12638p pro...    34   0.22 
AE014296-1642|AAF50280.1|  260|Drosophila melanogaster CG3672-PA...    34   0.22 
AE013599-1862|AAM70997.1|  579|Drosophila melanogaster CG8547-PB...    29   4.7  
AE013599-1861|AAF58267.3|  579|Drosophila melanogaster CG8547-PA...    29   4.7  

>AY060687-1|AAL28235.1|  260|Drosophila melanogaster GH12638p
           protein.
          Length = 260

 Score = 33.9 bits (74), Expect = 0.22
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 11  QNDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPV 154
           Q +G Y P +  YQ       +P       PE TG P+GFFY+F Y V
Sbjct: 194 QQEGRYQPTEPEYQPY--VHEEP--PYVPGPEETGEPKGFFYAFDYNV 237


>AE014296-1642|AAF50280.1|  260|Drosophila melanogaster CG3672-PA
           protein.
          Length = 260

 Score = 33.9 bits (74), Expect = 0.22
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 11  QNDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPV 154
           Q +G Y P +  YQ       +P       PE TG P+GFFY+F Y V
Sbjct: 194 QQEGRYQPTEPEYQPY--VHEEP--PYVPGPEETGEPKGFFYAFDYNV 237


>AE013599-1862|AAM70997.1|  579|Drosophila melanogaster CG8547-PB,
           isoform B protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
 Frame = +2

Query: 5   YGQNDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTG---PPRGFFYSFTYPVSSIVLKS 175
           Y     +++PN G   +     G P N  Y +  P G   PP    YS+ Y  SS    +
Sbjct: 375 YPPRSPAHSPNYGGPHSPPLQPGLPPNNAYPQQPPNGNGYPPNSTTYSYKY--SSTTNTN 432

Query: 176 DLQGG--SAPTRYPAD 217
           + +G    +P+ +P D
Sbjct: 433 NRRGPDYGSPSPFPVD 448


>AE013599-1861|AAF58267.3|  579|Drosophila melanogaster CG8547-PA,
           isoform A protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
 Frame = +2

Query: 5   YGQNDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTG---PPRGFFYSFTYPVSSIVLKS 175
           Y     +++PN G   +     G P N  Y +  P G   PP    YS+ Y  SS    +
Sbjct: 375 YPPRSPAHSPNYGGPHSPPLQPGLPPNNAYPQQPPNGNGYPPNSTTYSYKY--SSTTNTN 432

Query: 176 DLQGG--SAPTRYPAD 217
           + +G    +P+ +P D
Sbjct: 433 NRRGPDYGSPSPFPVD 448


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,251,522
Number of Sequences: 53049
Number of extensions: 568235
Number of successful extensions: 1796
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)