Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28p16
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99277-6|CAB16484.1|  677|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82075-3|CAB04929.2|  784|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF293972-1|AAG02478.1|  784|Caenorhabditis elegans auxilin protein.    29   3.4  
Z70212-4|CAA94164.1|  322|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z68114-9|CAA92156.1|  320|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z99277-6|CAB16484.1|  677|Caenorhabditis elegans Hypothetical
           protein Y53C12A.1 protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 126 DSEERIGPAITQINRHPYVGT-LIKNGTYICSAVILNTYWLA 248
           DS+ RI P    +  HP +   L+K GTY+    ILN ++ A
Sbjct: 337 DSDPRIRPTSRDLLDHPVIKKKLMKRGTYVKCISILNGFFYA 378


>Z82075-3|CAB04929.2|  784|Caenorhabditis elegans Hypothetical
           protein W07A8.3 protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 160 CVIAGPILSSLSYFSPDSASTSLSILPLTNTIILAKTTNKC 38
           C+IA   +S +S F  DS       LP+T  + L +T + C
Sbjct: 177 CLIASRTISRVSEFMSDSLPNRFDRLPVTYHLFLEQTKHVC 217


>AF293972-1|AAG02478.1|  784|Caenorhabditis elegans auxilin protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 160 CVIAGPILSSLSYFSPDSASTSLSILPLTNTIILAKTTNKC 38
           C+IA   +S +S F  DS       LP+T  + L +T + C
Sbjct: 177 CLIASRTISRVSEFMSDSLPNRFDRLPVTYHLFLEQTKHVC 217


>Z70212-4|CAA94164.1|  322|Caenorhabditis elegans Hypothetical
           protein R04D3.6 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/57 (21%), Positives = 28/57 (49%)
 Frame = -2

Query: 289 YDDIMALSKQSDSVASQYVLRITALQMYVPFLIRVPTYGCRFICVIAGPILSSLSYF 119
           Y  +  +S     +   +V+ +T +Q  +P++  +P Y   + C++ G  +  L +F
Sbjct: 221 YHQMENMSAPRQQLYKSFVMGLT-IQCVLPYVFYIPIYTLYYYCLLTGEEILFLEFF 276


>Z68114-9|CAA92156.1|  320|Caenorhabditis elegans Hypothetical
           protein F17A2.12 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 268 SKQSDSVASQYVLRITALQMYVPFLIRVPTYGCRFICVIAGPILSSLSYF 119
           SK   S    +V  +T +Q ++P +  VP +G  F C++    +    YF
Sbjct: 225 SKWKKSQIQVFVKGLT-IQAFLPLIFYVPVFGLYFYCILTHTEILFQQYF 273


>Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical
           protein R07B5.3 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 145 PILSSLSYFSPDSASTSLSILPLTNTIILAKTTNKCSQRRIMFVI 11
           P+L ++ YFS  S+     +   T T+IL    NK  Q  I+F++
Sbjct: 110 PLLVAVYYFSNYSSQLYTVLFCSTRTLILFNEKNKIYQLCILFLV 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,625
Number of Sequences: 27780
Number of extensions: 358074
Number of successful extensions: 965
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)