Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28p15
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 252 2e-67
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 247 7e-66
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 212 2e-55
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 212 2e-55
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 212 2e-55
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.3
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.4
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.4
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 4.4
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 28 5.8
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.8
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 7.7
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 28 7.7
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 28 7.7
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 252 bits (617), Expect = 2e-67
Identities = 121/184 (65%), Positives = 145/184 (78%)
Frame = +1
Query: 169 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 348
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 349 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 528
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 529 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQS 708
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A+ LARYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQ 180
Query: 709 QRIV 720
+V
Sbjct: 181 NGLV 184
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 247 bits (604), Expect = 7e-66
Identities = 120/185 (64%), Positives = 145/185 (78%), Gaps = 1/185 (0%)
Frame = +1
Query: 169 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 348
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 349 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 528
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 529 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQ 705
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A N+ +RYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQ 180
Query: 706 SQRIV 720
+V
Sbjct: 181 QNGLV 185
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 212 bits (518), Expect = 2e-55
Identities = 106/176 (60%), Positives = 131/176 (74%)
Frame = +1
Query: 193 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 372
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 373 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 552
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 553 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIV 720
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +V
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLV 187
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 212 bits (518), Expect = 2e-55
Identities = 106/176 (60%), Positives = 131/176 (74%)
Frame = +1
Query: 193 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 372
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 373 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 552
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 553 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIV 720
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +V
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLV 187
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 212 bits (518), Expect = 2e-55
Identities = 106/176 (60%), Positives = 131/176 (74%)
Frame = +1
Query: 193 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 372
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 373 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 552
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 553 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIV 720
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +V
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLV 187
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 429 G*RWNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 566
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 199 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 342
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 343 YRQLLFSSDA 372
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 199 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 342
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 343 YRQLLFSSDA 372
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 199 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 342
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 343 YRQLLFSSDA 372
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = +3
Query: 405 VPRDPLPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRP-- 578
+P +P G P G+ G G P H G QG P + M G P+P P
Sbjct: 587 MPPGMMPPG--MMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMPGMPHGPPQPPQNPAL 644
Query: 579 -VQEGRLPLRQVALRAEDWPQHPLV 650
V R + A P HP++
Sbjct: 645 MVAGNRAGSAEAAAAQMGNPHHPMM 669
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 487 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 666
++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E
Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79
Query: 667 N 669
+
Sbjct: 80 S 80
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 436 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 540
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -1
Query: 616 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 527
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 590 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 429
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +3
Query: 105 EG*RQRATGVRMEAGVRYQSNNVHLLSIPNS*AAGGAQEDRSSNCSSRKGYPGR*RIHRY 284
EG R+ VR E +R N ++S A + CS R P R IH +
Sbjct: 64 EGKRRSPPRVRREPPMRSPGRN-EVMSPERRYGTRSASSRSQNECSCRNRAPARSPIHDH 122
Query: 285 NGQAFAGHRR 314
+ HRR
Sbjct: 123 ERLNYRNHRR 132
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 109 PSFCL*VALFLFYLLNFYKISIQTYSTVFSY-FN 11
P C + F FY+ F+++ I ST+ Y FN
Sbjct: 256 PCICFHIPSFFFYIAPFFELEISFRSTIIIYGFN 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,300,336
Number of Sequences: 27780
Number of extensions: 397475
Number of successful extensions: 1332
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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