Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28p14
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.20 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.20 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +1

Query: 307  HNVAQTRAKGPQSKYPSPATENQEYGW-YTTPLVK-----MNRSDKRFY 435
            +NV     + PQ     P+ E  E  W Y  PL++     +NR+++ F+
Sbjct: 1148 NNVEDNYMEAPQDNVSQPSDEVMENSWFYDGPLIRGEVHYLNRNEETFW 1196


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +1

Query: 307  HNVAQTRAKGPQSKYPSPATENQEYGW-YTTPLVK-----MNRSDKRFY 435
            +NV     + PQ     P+ E  E  W Y  PL++     +NR+++ F+
Sbjct: 1148 NNVEDNYMEAPQDNVSQPSDEVMENSWFYDGPLIRGEVHYLNRNEETFW 1196


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 127 MAIDIHMLNEIIYREVKHF 183
           M + IH+  ++IYR   HF
Sbjct: 681 MNLIIHVGTQLIYRPFSHF 699


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,031
Number of Sequences: 336
Number of extensions: 2953
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)