Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28p14
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 31 0.45
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 30 1.0
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z73098-11|CAA97338.1| 225|Caenorhabditis elegans Hypothetical p... 28 4.2
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 28 5.5
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 28 5.5
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 28 5.5
Z99281-26|CAE18029.1| 377|Caenorhabditis elegans Hypothetical p... 27 7.3
Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical pr... 27 7.3
U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine rece... 27 7.3
Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical... 27 9.6
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 27 9.6
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 27 9.6
AF016658-5|AAB66044.1| 186|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 31.5 bits (68), Expect = 0.45
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 181 FRNYKIYRP-NFGSIPVTGKFYAAHDQLKAESEEQTKKVDDYYHNVAQTRAKGPQSKYPS 357
F + ++Y+ N +P T F+A H Q + + + Q+ K H Q + S+
Sbjct: 114 FSDEELYQALNMSPLPPTATFHALHQQQQQQQQHQSMKQQHAMHLQQQPQTDYLSSEVCY 173
Query: 358 PATENQEYGWY 390
P+T + E Y
Sbjct: 174 PSTSSYEPSGY 184
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 299 ITITTSPRPGRRDHKANIRRRPLRTKSTAGTPHRSSK*TGAINVSTSRRRKAKTPKSK 472
+ I+ SPR R + RR +R+ S RSS G++ T R R +K +S+
Sbjct: 73 VVISPSPRRRRSSTSRSSRRSVVRSASRGSVSRRSSS-RGSVYGRTGRSRSSKRSRSR 129
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = +1
Query: 82 KSAMGGDAKCTFGTRMAIDIHMLNEIIYREVKHFRNYKIYRPNFGSIPVTGKFYAAHDQL 261
+S +GGD K R +I H+ + + +K + Y + + +TG A +L
Sbjct: 450 ESPIGGDEKRQQKARESIS-HLFDAEMDASIKEAKKYSVSFDKYIKPKITGALKHAKIKL 508
Query: 262 KAESEEQTKKVDDYYHNV 315
+ + + D YYH +
Sbjct: 509 MSRKRQSAEPDDFYYHEL 526
>Z73098-11|CAA97338.1| 225|Caenorhabditis elegans Hypothetical
protein T21C9.11 protein.
Length = 225
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 340 QSKYPSPATENQEYGWYTTPLVKMNRSDKRFYQPKKESENTKIEIVI 480
Q K+PSP E+ T P++ ++R K Y P + + I I
Sbjct: 5 QFKHPSPTNEDGIKAPSTEPMLPIHRVQKPIYPPLPQIRKNRFNIQI 51
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 98 VTRNARSAHVWPSTYTCLTRSYTGKSNISGTIKFTDP 208
+T N S H + ST T T ++TG S IS + T P
Sbjct: 828 ITMNLESYH-FQSTITATTINFTGTSEISSELTPTSP 863
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 136 RWPYVCRTCISRHRPSLIYIC 74
R PYVC+T R R S+ Y C
Sbjct: 460 RCPYVCKTVFGRLRTSVYYKC 480
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 136 RWPYVCRTCISRHRPSLIYIC 74
R PYVC+T R R S+ Y C
Sbjct: 460 RCPYVCKTVFGRLRTSVYYKC 480
>Z99281-26|CAE18029.1| 377|Caenorhabditis elegans Hypothetical
protein Y57G11C.46 protein.
Length = 377
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 557 TSLIISRCECLLKCHLDFLDLGLDIRITISILVFSLSFF 441
TS+ CE L+ C L F G + T ++L+F L F
Sbjct: 106 TSMSYESCELLISCRLCF---GFRVIATATVLIFCLLLF 141
>Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical
protein C31C9.8 protein.
Length = 390
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 435 VETFIAPVHFDERCGVPAVLLVLSGRRRIFALWSLR 328
+ T I +H E G LLV SG R+ +W +R
Sbjct: 349 IHTGITAIHLQETLG----LLVTSGHNRVIMIWDVR 380
>U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 9 protein.
Length = 341
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 462 GVFAFLLRLVETFIAPVHFDERCGVPAVLLVLSGRRRIFALWSLRP 325
GVF F ++ + P+ C +PA + +LS I +L+ +RP
Sbjct: 248 GVFCFFIQAIRLITHPIFECLICAIPAPIPLLSS---IISLYHIRP 290
>Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical
protein F45H11.3 protein.
Length = 738
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 367 ENQEYGWYTTPLVKMNRSDKR 429
ENQ+Y W TP K ++ +KR
Sbjct: 113 ENQDYVWNVTPQSKSHKMEKR 133
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 271 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 399
+EE K+++ +Y N Q+ P+++ P P Y TP
Sbjct: 413 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 455
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 271 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 399
+EE K+++ +Y N Q+ P+++ P P Y TP
Sbjct: 388 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 430
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 271 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 399
+EE K+++ +Y N Q+ P+++ P P Y TP
Sbjct: 447 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 489
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 435 VETFIAPVHFDERCGVPAVLLVLSGRRRIFALWSLR 328
+ T I +H E G LLV SG+ R+ +W +R
Sbjct: 374 IHTGITAMHLQETLG----LLVTSGQNRVIMIWDVR 405
>AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical
protein Y47D3A.30 protein.
Length = 565
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 23 VINHTFGNSFRFYFYFRTDINQRWAVTRNARSAHVWPSTY 142
+I+H SF F FY + RW V N +AHV+ Y
Sbjct: 268 IIHHFLSLSFAFTFYSQNFALHRWIVFFNL-TAHVFLYAY 306
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 271 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 399
+EE K+++ +Y N Q+ P+++ P P Y TP
Sbjct: 388 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 430
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 271 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 399
+EE K+++ +Y N Q+ P+++ P P Y TP
Sbjct: 447 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 489
>AF016658-5|AAB66044.1| 186|Caenorhabditis elegans Hypothetical
protein B0047.4 protein.
Length = 186
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 322 TRAKGPQSKYPSPATENQEYGWYTTPLVKMNRSDKRFYQPK-KESE 456
T PQ Y +TEN W+ L K NR F+ K KE E
Sbjct: 30 TPVAAPQPAYTGRSTENFNIPWFIEILRKTNRLAVYFHCDKLKEDE 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,813,443
Number of Sequences: 27780
Number of extensions: 271276
Number of successful extensions: 935
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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