Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28p10
         (227 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   0.83 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   4.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   5.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   7.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   7.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 10  SACDLSSSVHPGFVMDICPDIHQTSDTTDAE*TDLSIRLQYMKVEDVFHTLPL 168
           S C L    H GF+    PD      T  AE    ++R+ +    D F+ LPL
Sbjct: 214 STCTLILGRHLGFLK---PDSSSELATRLAE----AVRIHFTASRDAFYGLPL 259


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 178 VNIPKGAYERHLQLSYIEV*SIN 110
           + IP+GA++  L+L  + V + N
Sbjct: 105 LRIPEGAFQPLLELKKLTVQTFN 127


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 124 LQYMKVEDVFHT 159
           +QY  V+D+F+T
Sbjct: 294 VQYQGVQDIFNT 305


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 33  SAPGLCNGHMPRHPSD 80
           SAP +    +P+HP D
Sbjct: 347 SAPTIDGIFLPKHPLD 362


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 33  SAPGLCNGHMPRHPSD 80
           SAP +    +P+HP D
Sbjct: 347 SAPTIDGIFLPKHPLD 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,837
Number of Sequences: 438
Number of extensions: 982
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3659655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)