Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28p07
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003318-1|AAO25078.1|  517|Drosophila melanogaster AT26991p pro...    32   0.62 
BT001317-1|AAN71072.1|  517|Drosophila melanogaster AT15066p pro...    32   0.62 
AE014296-204|AAN11465.1|  517|Drosophila melanogaster CG9130-PB,...    32   0.62 
AE014296-203|AAN11464.1|  517|Drosophila melanogaster CG9130-PA,...    32   0.62 
AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anem...    31   1.9  
AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-P...    31   1.9  
AY089441-1|AAL90179.1|  251|Drosophila melanogaster AT26009p pro...    29   5.8  
AE014296-202|AAF47461.2|  251|Drosophila melanogaster CG9129-PA ...    29   5.8  

>BT003318-1|AAO25078.1|  517|Drosophila melanogaster AT26991p
           protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +2

Query: 305 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 481
           KC KC      +F  + PI  +D    HV+ K ++ CK  + LS L          +++ 
Sbjct: 84  KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134

Query: 482 DEIFGKDAKWDDKYMLGNATRLP 550
           +    ++  W+D  MLG+  +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156


>BT001317-1|AAN71072.1|  517|Drosophila melanogaster AT15066p
           protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +2

Query: 305 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 481
           KC KC      +F  + PI  +D    HV+ K ++ CK  + LS L          +++ 
Sbjct: 84  KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134

Query: 482 DEIFGKDAKWDDKYMLGNATRLP 550
           +    ++  W+D  MLG+  +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156


>AE014296-204|AAN11465.1|  517|Drosophila melanogaster CG9130-PB,
           isoform B protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +2

Query: 305 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 481
           KC KC      +F  + PI  +D    HV+ K ++ CK  + LS L          +++ 
Sbjct: 84  KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134

Query: 482 DEIFGKDAKWDDKYMLGNATRLP 550
           +    ++  W+D  MLG+  +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156


>AE014296-203|AAN11464.1|  517|Drosophila melanogaster CG9130-PA,
           isoform A protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +2

Query: 305 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 481
           KC KC      +F  + PI  +D    HV+ K ++ CK  + LS L          +++ 
Sbjct: 84  KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134

Query: 482 DEIFGKDAKWDDKYMLGNATRLP 550
           +    ++  W+D  MLG+  +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156


>AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anemia
            complementationgroup D2 protein protein.
          Length = 1478

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 501  SLPKISSIIFSHLTQLFSSALNLDKATSLHLSLALLKTCASLESSCT 361
            S+P+++++ F +  +   S LNL  A  LH  L  L    SL+S  +
Sbjct: 1123 SVPQLANLTFQYFLKYEKSVLNLSTAVHLHRLLCNLLKLGSLQSDAS 1169


>AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-PA
            protein.
          Length = 1478

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 501  SLPKISSIIFSHLTQLFSSALNLDKATSLHLSLALLKTCASLESSCT 361
            S+P+++++ F +  +   S LNL  A  LH  L  L    SL+S  +
Sbjct: 1123 SVPQLANLTFQYFLKYEKSVLNLSTAVHLHRLLCNLLKLGSLQSDAS 1169


>AY089441-1|AAL90179.1|  251|Drosophila melanogaster AT26009p
           protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 305 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCK 418
           KC KC      +F    PI  ED    HV+ K ++ CK
Sbjct: 70  KCGKCT-----LFTLESPITDEDVMHIHVYKKRTESCK 102


>AE014296-202|AAF47461.2|  251|Drosophila melanogaster CG9129-PA
           protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 305 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCK 418
           KC KC      +F    PI  ED    HV+ K ++ CK
Sbjct: 70  KCGKCT-----LFTLESPITDEDVMHIHVYKKRTESCK 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,383,497
Number of Sequences: 53049
Number of extensions: 591592
Number of successful extensions: 1625
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)