Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28o22
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...   160   1e-39
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...   115   3e-26
U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.    102   3e-22
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...   102   3e-22
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...   101   5e-22
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    97   1e-20
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    97   1e-20
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    90   2e-18
AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical...    73   3e-13
AF067608-16|AAC17657.2|  318|Caenorhabditis elegans Fk506-bindin...    56   2e-08
AL032663-6|CAA21766.2|  349|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score =  160 bits (388), Expect = 1e-39
 Identities = 75/108 (69%), Positives = 82/108 (75%)
 Frame = +2

Query: 371 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 550
           KLQIG+KKR E+C  KSRKGD LHMHYTGTL DGTEFDSS  R    TF LG G VIKGW
Sbjct: 26  KLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGW 85

Query: 551 DQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIE 694
           DQGLL MC GE+R L IPP L YG  GAPPKIP ++ L F VEL+KI+
Sbjct: 86  DQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELMKID 133


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score =  115 bits (277), Expect = 3e-26
 Identities = 55/106 (51%), Positives = 70/106 (66%)
 Frame = +2

Query: 374 LQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 553
           + I I    E C+ K++ GD LH  YT  L+DG+  DSS  R  P  FK+GSGQVIKG D
Sbjct: 148 VHIHITHEVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMD 207

Query: 554 QGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 691
             + GMC+GE+RK+VIPPELAYG  G PP IP ++ L F + L K+
Sbjct: 208 IAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSLEKL 253



 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 42/107 (39%), Positives = 56/107 (52%)
 Frame = +2

Query: 371 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 550
           K++I  K     C IKS  GD L   Y  +  +G    S+  +  P TF LG G+VI G 
Sbjct: 29  KIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIHGM 87

Query: 551 DQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 691
           +  + GMC GEQRK++IPPE  +   G   +  K  TL + VEL  I
Sbjct: 88  EIAMEGMCVGEQRKVIIPPEQGFDEDGDEVE-GKGETLYYFVELKSI 133


>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score =  102 bits (244), Expect = 3e-22
 Identities = 46/92 (50%), Positives = 60/92 (65%)
 Frame = +2

Query: 416 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 595
           K + G  +  HY  TL++G + DSS  RG P  FK+G G+VIKGWDQG+  M  GE+ KL
Sbjct: 16  KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKL 75

Query: 596 VIPPELAYGSAGAPPKIPKSATLTFHVELVKI 691
            I  +L YG  G PP+IP +ATL F VEL+ +
Sbjct: 76  TISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score =  102 bits (244), Expect = 3e-22
 Identities = 46/92 (50%), Positives = 60/92 (65%)
 Frame = +2

Query: 416 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 595
           K + G  +  HY  TL++G + DSS  RG P  FK+G G+VIKGWDQG+  M  GE+ KL
Sbjct: 16  KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKL 75

Query: 596 VIPPELAYGSAGAPPKIPKSATLTFHVELVKI 691
            I  +L YG  G PP+IP +ATL F VEL+ +
Sbjct: 76  TISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score =  101 bits (242), Expect = 5e-22
 Identities = 49/99 (49%), Positives = 63/99 (63%)
 Frame = +2

Query: 386 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLL 565
           IKK  +   +K   G  + +HY GTL++GT+FDSS  RG+  +F LG G VIKGWD G+ 
Sbjct: 20  IKKEGQGV-VKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVA 78

Query: 566 GMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVEL 682
            M +GE  +  I  +  YG AG+PPKIP  ATL F VEL
Sbjct: 79  TMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 47/100 (47%), Positives = 59/100 (59%)
 Frame = +2

Query: 392 KRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGM 571
           K  ED   KS+ GD +H  Y   L+DGT  DSS  R  P  FKL + +VIKG D  + GM
Sbjct: 159 KIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGM 218

Query: 572 CEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 691
           CEGE+R++VIP +  YG  G  P IP  A L F + L K+
Sbjct: 219 CEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258



 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
 Frame = +2

Query: 395 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMC 574
           + E C IKS+ GD+L   Y  +  DG E  S+  +  P TF LG GQVI G ++ + GMC
Sbjct: 39  KAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMC 97

Query: 575 EGEQRKLVIPPELAYGSAGAP-PKIPKSATLTFHVELVKI 691
           +GE+RK+VIP  L +G  G     I +  TL + V+LV +
Sbjct: 98  KGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDL 137


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 47/100 (47%), Positives = 59/100 (59%)
 Frame = +2

Query: 392 KRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGM 571
           K  ED   KS+ GD +H  Y   L+DGT  DSS  R  P  FKL + +VIKG D  + GM
Sbjct: 195 KIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGM 254

Query: 572 CEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 691
           CEGE+R++VIP +  YG  G  P IP  A L F + L K+
Sbjct: 255 CEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294



 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
 Frame = +2

Query: 395 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMC 574
           + E C IKS+ GD+L   Y  +  DG E  S+  +  P TF LG GQVI G ++ + GMC
Sbjct: 75  KAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMC 133

Query: 575 EGEQRKLVIPPELAYGSAGAP-PKIPKSATLTFHVELVKI 691
           +GE+RK+VIP  L +G  G     I +  TL + V+LV +
Sbjct: 134 KGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDL 173


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 45/102 (44%), Positives = 60/102 (58%)
 Frame = +2

Query: 386 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLL 565
           I K   D   K+  GD ++  Y   L+D T  DSS  R  P  F+L + +VI G D  + 
Sbjct: 152 IHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAMD 211

Query: 566 GMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 691
           GMCEGE+R++VIP E  YGS G+PP+IP  A L F + L K+
Sbjct: 212 GMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253



 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
 Frame = +2

Query: 404 DCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGE 583
           +C IKS  GD++  +Y  T + G E  S+  +  P TF LG  QVI G D+ + GMC GE
Sbjct: 44  ECEIKSAGGDVVDQYYKLTDEKGVEIGSNFGK-KPYTFTLGRNQVIPGMDRAMRGMCIGE 102

Query: 584 QRKLVIPPELAYG--SAGAP 637
            RK+VIPP+L +   S G P
Sbjct: 103 IRKVVIPPKLGFAKDSTGQP 122


>AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical
           protein Y18D10A.25 protein.
          Length = 290

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 35/78 (44%), Positives = 43/78 (55%)
 Frame = +2

Query: 416 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRKL 595
           KS+ G  +  HY   L DGT+ DSS  R  P  FK+G G+VIKGWDQG+  M   E+ KL
Sbjct: 212 KSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWDQGVAQMSVKEKSKL 271

Query: 596 VIPPELAYGSAGAPPKIP 649
            I P   +     P  IP
Sbjct: 272 TIAPAFGFEKGKLPAGIP 289



 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 30/90 (33%), Positives = 43/90 (47%)
 Frame = +2

Query: 413 IKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDQGLLGMCEGEQRK 592
           +    G L+  +    L D     S+    NP+ FK+G G+VI G D G+  M  GE   
Sbjct: 97  VMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIAT 156

Query: 593 LVIPPELAYGSAGAPPKIPKSATLTFHVEL 682
             +  +  YG AG    IP++A+LT  V L
Sbjct: 157 FHVSGKYGYGRAGFRGLIPRNASLTCKVRL 186


>AF067608-16|AAC17657.2|  318|Caenorhabditis elegans Fk506-binding
           protein family protein7 protein.
          Length = 318

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
 Frame = +2

Query: 374 LQIGIKKR--PEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKG 547
           L I I+K   P  C  ++++ D +  HY    +D  +   +   G P+T +LG+G ++ G
Sbjct: 73  LDIKIEKTFVPAKCPQQAKRLDFVTFHYKVFTEDNKKVYQTYGTG-PVTIQLGTGMIMPG 131

Query: 548 WDQGLLGMCEGEQRKLVIPPELAYGSAGAPPK-IPKSAT-LTFHVELVKIE 694
            D+GL GMC  E RK+ +P  ++  S     K IP     L F++E+V+I+
Sbjct: 132 LDKGLKGMCAEELRKVRVPYRMSRKSKSKVWKNIPNDENWLIFNIEMVEIK 182


>AL032663-6|CAA21766.2|  349|Caenorhabditis elegans Hypothetical
           protein Y75B12B.7 protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 372 NYKLALRKDLRTVPSRAAKEIFCICTTLAL*MTVQNLIVQFLE 500
           ++ + +RK LR+ P  +   + CIC  L L    QN I   LE
Sbjct: 36  HFSILIRKSLRSSPVFSMMFVICICDLLQLLTQTQNDIKYILE 78


>Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical
           protein C33D9.3a protein.
          Length = 354

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 513 PSNLVLVKLLRVGIKGYLECAKENNVNLSFHRNW 614
           P+ LV  +L R   K Y +C K++ +++++  NW
Sbjct: 97  PTRLVASELNRNVSKTYSDCEKKHFLDVAYENNW 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,796,917
Number of Sequences: 27780
Number of extensions: 249316
Number of successful extensions: 525
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)