Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28o18
         (257 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical pr...    28   0.80 
U53337-5|AAP40522.1|  377|Caenorhabditis elegans Hypothetical pr...    28   1.1  
U53337-4|AAA96186.2|  636|Caenorhabditis elegans Hypothetical pr...    28   1.1  
U97003-7|AAB52274.1|  357|Caenorhabditis elegans Hypothetical pr...    27   1.8  
AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    27   1.8  
U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine rece...    26   3.2  
U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AF022972-11|AAN84825.1|  370|Caenorhabditis elegans Udp-glucuron...    26   4.2  
AF022972-10|AAC48233.2|  523|Caenorhabditis elegans Udp-glucuron...    26   4.2  
U70858-6|AAB09180.2|  299|Caenorhabditis elegans Serpentine rece...    25   7.4  
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,...    25   9.8  
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,...    25   9.8  
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,...    25   9.8  
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,...    25   9.8  
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,...    25   9.8  
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip...    25   9.8  
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip...    25   9.8  
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip...    25   9.8  
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip...    25   9.8  

>Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical
           protein C03E10.3 protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 0.80
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 252 FFNILLFIHSEVLHIIIYTFIIYSFHKHTQQLIF 151
           F NIL    +++ +I +Y F + SF  +T  + F
Sbjct: 350 FLNILYLSSNQITYIYLYLFFVTSFKLNTSSISF 383


>U53337-5|AAP40522.1|  377|Caenorhabditis elegans Hypothetical
           protein R02E12.2b protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 228 HSEVLHIIIYTFIIYSFHKHTQQLIFNIPS--FST 130
           H  +  II+Y+ + Y+F  + Q  +F+I S  FST
Sbjct: 166 HDHLAKIILYSDVFYTFFLYVQSEVFDISSDAFST 200


>U53337-4|AAA96186.2|  636|Caenorhabditis elegans Hypothetical
           protein R02E12.2a protein.
          Length = 636

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 228 HSEVLHIIIYTFIIYSFHKHTQQLIFNIPS--FST 130
           H  +  II+Y+ + Y+F  + Q  +F+I S  FST
Sbjct: 425 HDHLAKIILYSDVFYTFFLYVQSEVFDISSDAFST 459


>U97003-7|AAB52274.1|  357|Caenorhabditis elegans Hypothetical
           protein F47C10.4 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 66  IINVANQKSNCFATWVQQFISQLKRKEY*KLIVGYVYEN 182
           ++ V NQK +  AT ++  + Q  R+E   L+  + YEN
Sbjct: 102 MLEVKNQKDDAVATLIESLLYQDARREK-NLMTHFTYEN 139


>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 249 FNILLFIHSEVLHIIIYTFIIYS 181
           F I+LFIHS ++ + ++ +II S
Sbjct: 80  FFIILFIHSSIISLRVFVYIISS 102


>U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 3 protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -1

Query: 86  LICYINNKCCLKYFLSN--TMSGYY 18
           L C++  +CC  YFLS+    S YY
Sbjct: 109 LPCFVFERCCASYFLSDYEKRSRYY 133


>U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical
           protein B0252.1 protein.
          Length = 727

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 163 LGMFMKTINNKSIYNDMEYFR 225
           LG   KT++N+ I+NDM Y +
Sbjct: 307 LGFLDKTVDNQVIHNDMFYLQ 327


>AF022972-11|AAN84825.1|  370|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein39, isoform b
           protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 31  IVFDKKYFKQHLLLM*QIKNQIVSPR 108
           I+FD  Y K  L L  Q++NQ + P+
Sbjct: 276 ILFDSSYAKNALKLAEQLENQPIKPK 301


>AF022972-10|AAC48233.2|  523|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein39, isoform a
           protein.
          Length = 523

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 31  IVFDKKYFKQHLLLM*QIKNQIVSPR 108
           I+FD  Y K  L L  Q++NQ + P+
Sbjct: 429 ILFDSSYAKNALKLAEQLENQPIKPK 454


>U70858-6|AAB09180.2|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein35 protein.
          Length = 299

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -3

Query: 252 FFNILLFIHSEVLHIIIYTFIIYSFH--KHTQQLIFNI 145
           +F I + +H++V+  ++ TF   S H       L+FNI
Sbjct: 231 YFTIPMIVHNDVIGFLLSTFYWSSIHAMDGILTLVFNI 268


>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2857

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2730 EKEQILKNNCFIC 2742


>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2836

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2709 EKEQILKNNCFIC 2721


>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2892

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2765 EKEQILKNNCFIC 2777


>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2719 EKEQILKNNCFIC 2731


>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2719 EKEQILKNNCFIC 2731


>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform e protein.
          Length = 2857

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2730 EKEQILKNNCFIC 2742


>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform f protein.
          Length = 2846

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2719 EKEQILKNNCFIC 2731


>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform d protein.
          Length = 2836

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2709 EKEQILKNNCFIC 2721


>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform a protein.
          Length = 2892

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 134  EKEGILKINCWVC 172
            EKE ILK NC++C
Sbjct: 2765 EKEQILKNNCFIC 2777


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,560,003
Number of Sequences: 27780
Number of extensions: 98044
Number of successful extensions: 210
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)