Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28o17
(706 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.5
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 6.5
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 8.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.6
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 366 NNFLGNNKHPDYKNKVANLLDKYQKLGCNM 455
NN+ NN + +Y N N + Y+KL N+
Sbjct: 327 NNYNNNNYNNNYNNYNNNNYNNYKKLYYNI 356
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 NNFLGNNKHPDYKNKVANLLDKYQKLGCNMN 458
NN+ NN + +Y N N + Y+KL N+N
Sbjct: 328 NNY--NNNYNNYNNYNNNYNNNYKKLYYNIN 356
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 441 LGCNMNIKLHFLDSHV 488
L C MN+KL+ LD V
Sbjct: 158 LSCPMNLKLYPLDRQV 173
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 441 LGCNMNIKLHFLDSHV 488
L C MN+KL+ LD V
Sbjct: 158 LSCPMNLKLYPLDRQV 173
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 296 HQRSDLRSIEHSFN 255
HQR +++EHS N
Sbjct: 23 HQRKSSKNLEHSMN 36
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 426 DKYQKLGCNMNIKLHFLDSHVDFFP 500
+ Y+KL CN KL++ ++++ P
Sbjct: 94 NNYKKLYCNNYKKLYYNINYIEQIP 118
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 426 DKYQKLGCNMNIKLHFLDSHVDFFP 500
+ Y+KL CN KL++ ++++ P
Sbjct: 94 NNYKKLYCNNYKKLYYNINYIEQIP 118
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 426 DKYQKLGCNMNIKLHFLDSHVDFFP 500
+ Y+KL CN KL++ ++++ P
Sbjct: 94 NNYKKLYCNNYRKLYYNINYIEQIP 118
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 312 DATMNNTESDAWLA*DVVNNFLGNNKHPDYKNKVANLLDKYQKL 443
+ + + TE + ++++ N K+ +Y N N Y+KL
Sbjct: 65 ERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 312 DATMNNTESDAWLA*DVVNNFLGNNKHPDYKNKVANLLDKYQKL 443
+ + + TE + ++++ N K+ +Y N N Y+KL
Sbjct: 65 ERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 312 DATMNNTESDAWLA*DVVNNFLGNNKHPDYKNKVANLLDKYQKL 443
+ + + TE + ++++ N K+ +Y N N Y+KL
Sbjct: 65 ERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 312 DATMNNTESDAWLA*DVVNNFLGNNKHPDYKNKVANLLDKYQKL 443
+ + + TE + ++++ N K+ +Y N N Y+KL
Sbjct: 65 ERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 312 DATMNNTESDAWLA*DVVNNFLGNNKHPDYKNKVANLLDKYQKL 443
+ + + TE + ++++ N K+ +Y N N Y+KL
Sbjct: 65 ERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 312 DATMNNTESDAWLA*DVVNNFLGNNKHPDYKNKVANLLDKYQKL 443
+ + + TE + ++++ N K+ +Y N N Y+KL
Sbjct: 65 ERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 312 DATMNNTESDAWLA*DVVNNFLGNNKHPDYKNKVANLLDKYQKL 443
+ + + TE + ++++ N K+ +Y N N Y+KL
Sbjct: 65 ERSRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +3
Query: 426 DKYQKLGCNMNIKLHFLDSHVDFFPDN 506
D+Y++ N N ++H+D+ P++
Sbjct: 177 DRYKEEESNENYNWEHKETHIDWQPED 203
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,386
Number of Sequences: 438
Number of extensions: 4241
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -