Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28o13
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3071|AAF46625.1|  239|Drosophila melanogaster CG15225-P...    30   3.1  
BT028839-1|ABI34220.1|  220|Drosophila melanogaster RT01102p pro...    28   9.4  
BT028809-1|ABI34190.1|  220|Drosophila melanogaster RT01002p pro...    28   9.4  
AE013599-3715|AAF47087.1|  220|Drosophila melanogaster CG11182-P...    28   9.4  

>AE013599-3071|AAF46625.1|  239|Drosophila melanogaster CG15225-PA
           protein.
          Length = 239

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +1

Query: 73  YPYPGSF-TPMPPMEGNYPDHGDGMG 147
           YPYPG +  P PP    YP HG   G
Sbjct: 127 YPYPGYYPPPPPPYPYPYPGHGGHSG 152


>BT028839-1|ABI34220.1|  220|Drosophila melanogaster RT01102p
           protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 10  KFDSEASYIKKYNFKLMDGYAYPYPGSFTPMPPMEGNYPDHGDGMGVYYDNM 165
           K +  A YI K     +DG   P  GS    P ++G    HG  M   YD +
Sbjct: 169 KQERHAIYIMKDKSSKLDGRKNPVAGSKYLGPSLKGPQNGHGRQMKCLYDQI 220


>BT028809-1|ABI34190.1|  220|Drosophila melanogaster RT01002p
           protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 10  KFDSEASYIKKYNFKLMDGYAYPYPGSFTPMPPMEGNYPDHGDGMGVYYDNM 165
           K +  A YI K     +DG   P  GS    P ++G    HG  M   YD +
Sbjct: 169 KQERHAIYIMKDKSSKLDGRKNPVAGSKYLGPSLKGPQNGHGRQMKCLYDQI 220


>AE013599-3715|AAF47087.1|  220|Drosophila melanogaster CG11182-PA
           protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 10  KFDSEASYIKKYNFKLMDGYAYPYPGSFTPMPPMEGNYPDHGDGMGVYYDNM 165
           K +  A YI K     +DG   P  GS    P ++G    HG  M   YD +
Sbjct: 169 KQERHAIYIMKDKSSKLDGRKNPVAGSKYLGPSLKGPQNGHGRQMKCLYDQI 220


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,567,675
Number of Sequences: 53049
Number of extensions: 626865
Number of successful extensions: 2014
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)