Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28o09
         (664 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537746-1|CAD97823.1| 1624|Homo sapiens hypothetical protein pr...    33   0.91 
BC063594-1|AAH63594.1|  632|Homo sapiens ZNF292 protein protein.       33   0.91 
AY684300-1|AAV86070.1|  618|Homo sapiens zinc finger protein 292...    33   0.91 
AL139274-3|CAH73308.1| 2578|Homo sapiens protein ( Human DNA seq...    33   0.91 
AK023712-1|BAB14654.1|  627|Homo sapiens protein ( Homo sapiens ...    33   0.91 
AB011102-1|BAA25456.1| 1563|Homo sapiens KIAA0530 protein protein.     33   0.91 

>BX537746-1|CAD97823.1| 1624|Homo sapiens hypothetical protein
            protein.
          Length = 1624

 Score = 33.1 bits (72), Expect = 0.91
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 189  SIDIDKKPNKVLICLNKFNVHVKHVLHFSDDIGLNLIYSDKCEED 323
            S+D+ K P   L C + F  ++ +V+H   D G+ L  + K EED
Sbjct: 1494 SVDVGKFPCDQLECKSSFTTYLNYVVHLEADHGIGL-RASKTEED 1537


>BC063594-1|AAH63594.1|  632|Homo sapiens ZNF292 protein protein.
          Length = 632

 Score = 33.1 bits (72), Expect = 0.91
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 189 SIDIDKKPNKVLICLNKFNVHVKHVLHFSDDIGLNLIYSDKCEED 323
           S+D+ K P   L C + F  ++ +V+H   D G+ L  + K EED
Sbjct: 119 SVDVGKFPCDQLECKSSFTTYLNYVVHLEADHGIGL-RASKTEED 162


>AY684300-1|AAV86070.1|  618|Homo sapiens zinc finger protein 292
           protein.
          Length = 618

 Score = 33.1 bits (72), Expect = 0.91
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 189 SIDIDKKPNKVLICLNKFNVHVKHVLHFSDDIGLNLIYSDKCEED 323
           S+D+ K P   L C + F  ++ +V+H   D G+ L  + K EED
Sbjct: 105 SVDVGKFPCDQLECKSSFTTYLNYVVHLEADHGIGL-RASKTEED 148


>AL139274-3|CAH73308.1| 2578|Homo sapiens protein ( Human DNA sequence
            from clone RP11-393I2 on chromosome 6 Contains a
            reticulocalbin 1, EF-hand calcium binding domain (RCN1)
            pseudogene, nase.  ).
          Length = 2578

 Score = 33.1 bits (72), Expect = 0.91
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 189  SIDIDKKPNKVLICLNKFNVHVKHVLHFSDDIGLNLIYSDKCEED 323
            S+D+ K P   L C + F  ++ +V+H   D G+ L  + K EED
Sbjct: 2065 SVDVGKFPCDQLECKSSFTTYLNYVVHLEADHGIGL-RASKTEED 2108


>AK023712-1|BAB14654.1|  627|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13650 fis, clone PLACE1011433, weakly similar to
           TRANSCRIPTION FACTOR IIIA. ).
          Length = 627

 Score = 33.1 bits (72), Expect = 0.91
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 189 SIDIDKKPNKVLICLNKFNVHVKHVLHFSDDIGLNLIYSDKCEED 323
           S+D+ K P   L C + F  ++ +V+H   D G+ L  + K EED
Sbjct: 297 SVDVGKFPCDQLECKSSFTTYLNYVVHLEADHGIGL-RASKTEED 340


>AB011102-1|BAA25456.1| 1563|Homo sapiens KIAA0530 protein protein.
          Length = 1563

 Score = 33.1 bits (72), Expect = 0.91
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 189  SIDIDKKPNKVLICLNKFNVHVKHVLHFSDDIGLNLIYSDKCEED 323
            S+D+ K P   L C + F  ++ +V+H   D G+ L  + K EED
Sbjct: 1050 SVDVGKFPCDQLECKSSFTTYLNYVVHLEADHGIGL-RASKTEED 1093


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,214,964
Number of Sequences: 237096
Number of extensions: 1643766
Number of successful extensions: 3158
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3158
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)