Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28o08
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.48 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -1

Query: 195 YFLVTSFRIHLF*NFYILFGICCQFRFRTFQWL-RFIFKFLSSFRH 61
           Y+    F +HL     I++ IC Q     F +L R   ++  ++ H
Sbjct: 115 YYYYAFFGVHLAYGVVIIYSICVQTEKSVFDFLCRHTVEYFQNYIH 160


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 316 IKSALEEDYFLSPEQTEQYFQALSESS 396
           + S L  DYF+   Q  +Y+Q LS  S
Sbjct: 143 VTSYLLFDYFVQRNQEYKYYQILSHLS 169


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
 Frame = -1

Query: 198 WYFLVTSFRIHLF*NFYILFGICCQ--------FRFRTFQWLRFIFKFL 76
           WY+L+T+   +     Y    +CC         F F T +  +FI +F+
Sbjct: 39  WYYLLTNLTYNNTNRKYYWLNVCCLNLSIVTIFFNFATKKLEQFIVRFM 87


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 349 SPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQ 474
           SPE+ E +F+ L     R   P     +   I  +KE   RQ
Sbjct: 303 SPEEAETFFRELEAPCPRNYNPADYFIQLLAIVPEKEESSRQ 344


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 349 SPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQ 474
           SPE+ E +F+ L     R   P     +   I  +KE   RQ
Sbjct: 303 SPEEAETFFRELEAPCPRNYNPADYFIQLLAIVPEKEESSRQ 344


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 67  KTGKKLENKPEPLKSSKPELATDS 138
           KT K  E+ P P  S  PE+   S
Sbjct: 107 KTWKVEEDSPSPTSSVSPEVKDSS 130


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 428 FTVPPGPDQRFEDSLNA*KYCSV 360
           FT+    +Q FE  L A  YC V
Sbjct: 424 FTIGYDLNQHFETGLPAGSYCDV 446


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 171 IHLF*NFYILFGICCQF 121
           ++ F + +  F ICC F
Sbjct: 68  MYAFTHIFFFFAICCDF 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,635
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)