Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28o06
(226 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0934 + 24539917-24539996,24540069-24540345 30 0.29
09_02_0530 + 10285844-10287217 29 0.51
10_08_0457 + 18076911-18077272,18077356-18077475,18077554-180777... 28 1.2
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 27 1.5
06_02_0315 - 14230234-14232771 27 1.5
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 27 2.0
08_02_1577 + 27985066-27985434,27985520-27985594,27986159-279863... 26 3.6
03_05_0185 + 21713500-21714291 26 3.6
03_01_0136 + 1069136-1069292,1070783-1071060,1071246-1071602,107... 26 3.6
01_06_0307 - 28361538-28361606,28361684-28361854,28361963-283620... 26 3.6
01_01_0897 + 7070539-7071522,7071949-7072620 26 3.6
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 24 4.2
08_02_1572 - 27952418-27952727,27952872-27953133,27954018-279541... 26 4.7
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 26 4.7
12_02_0594 - 20883859-20884200,20884250-20884528,20884931-208851... 25 8.2
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 25 8.2
09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419 25 8.2
02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354 25 8.2
02_04_0370 - 22427559-22427590,22427783-22427964,22428754-224289... 25 8.2
>12_02_0934 + 24539917-24539996,24540069-24540345
Length = 118
Score = 29.9 bits (64), Expect = 0.29
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 31 ERLKEEKKKMEDESAGWVPKNSG 99
++ KEE+ + EDES GW P+ G
Sbjct: 81 KKRKEERMEEEDESDGWAPRADG 103
>09_02_0530 + 10285844-10287217
Length = 457
Score = 29.1 bits (62), Expect = 0.51
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 79 WVPKNSGGDIPLVLNEPGKDVTRQEA*Y 162
WVP + GGDIPL L G+D T A Y
Sbjct: 47 WVPHHPGGDIPL-LTLAGQDATDAFAAY 73
>10_08_0457 +
18076911-18077272,18077356-18077475,18077554-18077782,
18077993-18078652,18079224-18079425,18079521-18079611,
18079780-18079837
Length = 573
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 13 LEIDEYERLKEEKKKMEDESAGWVPKN--SGGDIPLVLNE 126
LEI+E ++E+ +ED S W+ K GGDI + E
Sbjct: 519 LEIEETGEIEEQLHILEDLSPDWISKKVIPGGDILYSIKE 558
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 19 IDEYERLKEEKKKMEDESA 75
++EYE+LK EK+K+E E A
Sbjct: 739 MEEYEQLKSEKRKLEMELA 757
>06_02_0315 - 14230234-14232771
Length = 845
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 16 EIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDV 141
E EY +E+++K+E E A V K+S ++ L G+D+
Sbjct: 433 EASEYGDCREDEEKIEPEEAPIVRKDSVLEVALSGEATGRDI 474
>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 22 DEYERLKEEKKKMEDESAGWVPKN 93
D ERL++E+ KM+D WV N
Sbjct: 1518 DGEERLRKEESKMQDIQRKWVASN 1541
>08_02_1577 +
27985066-27985434,27985520-27985594,27986159-27986320,
27986415-27986590,27986681-27986756,27987154-27987282,
27987363-27987482,27987734-27987815,27988016-27988110,
27988427-27988491,27988604-27988802,27989426-27989620,
27989866-27989960,27990059-27990194,27990265-27990482,
27990729-27990856,27991148-27991617
Length = 929
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 67 ESAGWVPKNSGGDIPLVLNEPGKDVTR 147
ES G VP+ +GG +P GKD R
Sbjct: 13 ESNGVVPERNGGAVPAKQQLDGKDTLR 39
>03_05_0185 + 21713500-21714291
Length = 263
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 31 ERLKEEKKKMEDESAGWVPKNSGGDIPLVLNE 126
ER KE KKM G +P D P VL+E
Sbjct: 210 ERKKERMKKMMRTLKGIIPGGDRMDTPAVLDE 241
>03_01_0136 +
1069136-1069292,1070783-1071060,1071246-1071602,
1071706-1072119,1072221-1072302,1072429-1073093
Length = 650
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNE--PGKDVTRQ 150
+ Q+EI + E K+EKK++E+ + N G+I + +E P +D+ Q
Sbjct: 369 RLQVEIADMEVFKDEKKRVENLRGVKLVNNDLGEIVVEGDESNPTEDIIAQ 419
>01_06_0307 -
28361538-28361606,28361684-28361854,28361963-28362027,
28362467-28362565,28363005-28363099,28363199-28363413,
28364394-28364735,28365505-28365645,28365774-28365945,
28366073-28366176,28366799-28366911,28367158-28367222,
28367564-28367691
Length = 592
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 4 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTR 147
+Y LE D E KK ED G G +P++ N P ++R
Sbjct: 219 EYGLEWDSSNTEAELNKKYEDLLDGSGSSARQGQLPIIENSPVASISR 266
>01_01_0897 + 7070539-7071522,7071949-7072620
Length = 551
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 19 IDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQEA*YEAEVCCMVL 189
ID++ R +E ++M+D+ G D+ L +NE KD Q E + M++
Sbjct: 276 IDDHRRRREGGRRMDDDGGG--DHRDFVDVLLDVNETDKDAGIQLGTVEIKAIIMLI 330
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 23.8 bits (49), Expect(2) = 4.2
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 13 LEIDEYERLKEEKKKMEDES 72
+ ++EYE++ EEK+K ++S
Sbjct: 275 MTLEEYEKVLEEKRKALEDS 294
Score = 20.6 bits (41), Expect(2) = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 46 EKKKMEDESAGWVPKN 93
EKKK++DE+A +N
Sbjct: 313 EKKKLDDENASKKAEN 328
>08_02_1572 -
27952418-27952727,27952872-27953133,27954018-27954107,
27955653-27955695
Length = 234
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 22 DEYERLKEEKKKMEDESAGWVPKNS 96
+E R+KEE+++ E+ G VPK S
Sbjct: 65 EEIRRVKEEEEQSMREALGLVPKRS 89
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 85 PKNSGGDIPLVLNEPGKDVTRQEA*YEAEVCCMV 186
P +G +I V+ E GK+V R +A E V CMV
Sbjct: 77 PVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMV 110
>12_02_0594 -
20883859-20884200,20884250-20884528,20884931-20885106,
20885254-20885725
Length = 422
Score = 25.0 bits (52), Expect = 8.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 37 LKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTR 147
+K+EKK+ E V KN+ + LV E +D+ R
Sbjct: 152 VKQEKKECSTEVGAVVLKNAPKNFKLVAPEIQRDIVR 188
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 25.0 bits (52), Expect = 8.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 85 PKNSGGDIPLVLNEPGKDVTRQEA*YEAEVCCMV 186
P G +I V+ E GK+VTR +A V CMV
Sbjct: 70 PLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMV 103
>09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419
Length = 396
Score = 25.0 bits (52), Expect = 8.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 31 ERLKEEKKKMEDESAGWV 84
E+ K +KKK E+E A W+
Sbjct: 221 EKKKRKKKKEEEEEATWI 238
>02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354
Length = 847
Score = 25.0 bits (52), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 100 GDIPLVLNEPGKDVTRQEA*YEAEVCCMV 186
G P+VL + G V + A Y A CC+V
Sbjct: 401 GYTPIVLIDRGVSVHEKAAYYAAAECCVV 429
>02_04_0370 -
22427559-22427590,22427783-22427964,22428754-22428939,
22429125-22429280,22429366-22429589,22430933-22430968,
22431390-22431539
Length = 321
Score = 25.0 bits (52), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 180 AAYFSFISGFLSCYIFSWLI 121
A +F + L C++F WL+
Sbjct: 34 AVFFLVVRYLLDCFVFEWLV 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,940,575
Number of Sequences: 37544
Number of extensions: 73032
Number of successful extensions: 297
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 14,793,348
effective HSP length: 54
effective length of database: 12,765,972
effective search space used: 255319440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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