Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28n15
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical pr...    33   0.22 
Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    31   0.51 
AF036702-8|AAR85905.1|  377|Caenorhabditis elegans Hypothetical ...    30   1.2  
U64608-2|AAB04591.1|  537|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z92838-3|CAB07409.2|  440|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z93378-7|CAB07587.1|  605|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z93375-5|CAB07566.1|  605|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z74040-1|CAA98514.2|  340|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical ...    27   8.3  
AF038618-1|AAB92068.2|  386|Caenorhabditis elegans Hypothetical ...    27   8.3  

>U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical
           protein F42A10.1 protein.
          Length = 712

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 388 ESKEAIRQ-TNEFLEKWRLRRVSAPLMTSRKYPLDSVSRLIPTD 516
           ES++ +RQ T EF++K+R     AP++ SR   L+ +  L+P +
Sbjct: 433 ESQQQLRQHTQEFIDKFRYNAKRAPMVQSRIKMLEKLPVLLPVE 476


>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
           protein Y57G11B.5 protein.
          Length = 225

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +1

Query: 118 YTFVFLSLFLVDYLLGNGFVDMFQTIFCKIACFVKKTLREEAKKTQLV-GKENPISIPVI 294
           YT   LS   +D L G  F  + Q      +CF K    EE++K +   G    + +  I
Sbjct: 133 YTACVLSEVPMDQLQGFTFKTVLQYAKPVTSCFAKHQECEESEKAEFYKGMMASVELVDI 192

Query: 295 FIEIL--VLSLTIAFLNKY-KKYRAKDRIDEL 381
           F+ IL  V S  + F++ + KK+  KD +D L
Sbjct: 193 FVPILEAVHSGNLEFIHTFDKKFNPKD-LDNL 223


>AF036702-8|AAR85905.1|  377|Caenorhabditis elegans Hypothetical
           protein F33D4.5 protein.
          Length = 377

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +1

Query: 388 ESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSVSRLIPTDFSYLDEEP 540
           E KEA R+   F+EK  +RR+   L  S+++P     RL   D + L E+P
Sbjct: 51  EEKEAARKQYSFMEKINIRRMKNLLSPSQQFP----GRLNIDDEANLPEKP 97


>U64608-2|AAB04591.1|  537|Caenorhabditis elegans Hypothetical
           protein T22B7.4 protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 334 LNKYKKYRAKDRIDELLNESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSV 495
           +NK +K  AK    + LN+ +E + Q  E +   +L R +A   +  K  L+++
Sbjct: 64  MNKREKNEAKTLYKKHLNQGQEGMNQLEELINNMKLWRANAINESREKGDLNAI 117


>Z92838-3|CAB07409.2|  440|Caenorhabditis elegans Hypothetical
           protein T03D8.4 protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 462 NDLTKISPRFSITLNTYRFFLLGRRTPRNQAFEARSTNTTHGHNR 596
           ND+ +++  F   ++  R  +L R  P  Q+   R  N T+G ++
Sbjct: 165 NDVVEMNDGFPTIMDKNRQIILSRTEPNWQSLNTRKPNQTYGRDQ 209


>Z93378-7|CAB07587.1|  605|Caenorhabditis elegans Hypothetical
           protein C38C6.6 protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +1

Query: 448 VSAPLMTSRKYPLDSVSRLIPTDFSYLDEEPQEIKPLKLEVPILHMAIIDTLGT 609
           VSA  +      L+   + I  D S+LD++ +E++ + L+       ++D L T
Sbjct: 16  VSAQSLVPNHVSLNEKRKHIEVDSSWLDKKQKEVQRVSLDASNKEKVVLDLLNT 69


>Z93375-5|CAB07566.1|  605|Caenorhabditis elegans Hypothetical
           protein C38C6.6 protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +1

Query: 448 VSAPLMTSRKYPLDSVSRLIPTDFSYLDEEPQEIKPLKLEVPILHMAIIDTLGT 609
           VSA  +      L+   + I  D S+LD++ +E++ + L+       ++D L T
Sbjct: 16  VSAQSLVPNHVSLNEKRKHIEVDSSWLDKKQKEVQRVSLDASNKEKVVLDLLNT 69


>Z74040-1|CAA98514.2|  340|Caenorhabditis elegans Hypothetical
           protein K10D6.2a protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 226 FSSRNKLSCRISFGTYQRNHCLTNN 152
           F S +  S ++SF T +R+HC T N
Sbjct: 295 FESTHPSSIKMSFHTEERSHCSTTN 319


>AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical
           protein T10D4.6 protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 456 AFNDLTKISPRFSITLNTYRFFLLGRRTPRNQAFE 560
           A  +L KI       LN Y  +++GRRT  NQ  E
Sbjct: 335 AEEELDKIPFEVKKNLNIYFHYIIGRRTTDNQKIE 369


>AF038618-1|AAB92068.2|  386|Caenorhabditis elegans Hypothetical
           protein F42G8.9 protein.
          Length = 386

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 441 AEGIGAFNDLTKISPRFSITLN 506
           ++ +G FN + KI PR S++L+
Sbjct: 269 SDSVGTFNSMEKIEPRVSVSLD 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,513,314
Number of Sequences: 27780
Number of extensions: 305395
Number of successful extensions: 943
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)