BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28n13
(677 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061487-1|AAL29035.1| 749|Drosophila melanogaster LD45152p pro... 31 1.9
AE014134-540|AAF51159.2| 749|Drosophila melanogaster CG3605-PA ... 31 1.9
U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein. 30 2.5
AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA... 30 2.5
AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA... 30 2.5
BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p pro... 30 3.3
BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro... 30 3.3
BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro... 30 3.3
AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisom... 30 3.3
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ... 30 3.3
AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-P... 30 3.3
BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p pro... 29 4.4
BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p pro... 29 4.4
AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p pro... 29 4.4
AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA... 29 4.4
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein... 29 7.7
L41642-1|AAA85085.1| 773|Drosophila melanogaster lin19 protein ... 29 7.7
AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein. 29 7.7
AF132161-1|AAD34749.1| 972|Drosophila melanogaster unknown prot... 29 7.7
AE014298-448|AAF45811.2| 626|Drosophila melanogaster CG2681-PA ... 29 7.7
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA... 29 7.7
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB... 29 7.7
AE013599-2818|AAF57601.1| 972|Drosophila melanogaster CG15110-P... 29 7.7
AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-P... 29 7.7
AB077850-1|BAB89399.1| 972|Drosophila melanogaster heparan sulf... 29 7.7
>AY061487-1|AAL29035.1| 749|Drosophila melanogaster LD45152p
protein.
Length = 749
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 188 ADVSRDNESEGDDNIENLLSEYYKYLERAH----KQQRAYENYKSKNEIAFVPQQRQVKA 355
ADV D+E + D+ + S+ +A K++R +N K +++I F QQ+ +A
Sbjct: 100 ADVGEDSEEDADNQVNGSASQKTGKQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQA 159
Query: 356 KASVKSGAYSSNYDH 400
+ + S H
Sbjct: 160 EENEPEAKDSETKAH 174
>AE014134-540|AAF51159.2| 749|Drosophila melanogaster CG3605-PA
protein.
Length = 749
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 188 ADVSRDNESEGDDNIENLLSEYYKYLERAH----KQQRAYENYKSKNEIAFVPQQRQVKA 355
ADV D+E + D+ + S+ +A K++R +N K +++I F QQ+ +A
Sbjct: 100 ADVGEDSEEDADNQVNGSASQKTGKQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQA 159
Query: 356 KASVKSGAYSSNYDH 400
+ + S H
Sbjct: 160 EENEPEAKDSETKAH 174
>U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein.
Length = 1526
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 203 DNESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEIAFVPQQRQVKAKASVKSGAY 382
D++ + DD + L E YK E AHK +++ KSK Q+Q ++ AS S
Sbjct: 537 DDDYDEDDPAKEALLEAYKQGEDAHKILDSWQQSKSKK------SQQQKQSPASPDSPEQ 590
Query: 383 SSNYDHP 403
+ HP
Sbjct: 591 DPSVPHP 597
>AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA
protein.
Length = 1932
Score = 30.3 bits (65), Expect = 2.5
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +2
Query: 158 NELENNVNVPADVSRDNESEGDDNIENLLSEYYKY--LERAHKQQRAYENYKSKNEIAFV 331
N+ E N D R N S G + + + + + L R K+ + + + + FV
Sbjct: 55 NQQEENEEEDMDRLRGNHSIGGSSQQLSGKQKWSFGRLFRKKKEAESASSSEEDRKAGFV 114
Query: 332 PQQRQVKAKASVKSGAYS---SNYDH 400
P QRQ +K K G S S +DH
Sbjct: 115 PAQRQSASKPKGKHGKGSRGCSKFDH 140
>AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA,
isoform A protein.
Length = 1526
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 203 DNESEGDDNIENLLSEYYKYLERAHKQQRAYENYKSKNEIAFVPQQRQVKAKASVKSGAY 382
D++ + DD + L E YK E AHK +++ KSK Q+Q ++ AS S
Sbjct: 537 DDDYDEDDPAKEALLEAYKQGEDAHKILDSWQQSKSKK------SQQQKQSPASPDSPEQ 590
Query: 383 SSNYDHP 403
+ HP
Sbjct: 591 DPSVPHP 597
>BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p protein.
Length = 1250
Score = 29.9 bits (64), Expect = 3.3
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = +2
Query: 38 FVSAVLAGICKCESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESE 217
F A+LA ES S + I P D I + AD E E VN + ES
Sbjct: 907 FEDAMLAAAESVESSS-QPKTISMVPLDDDIAAAFAADDDAEFEALVN---GGTMPTESN 962
Query: 218 GDDNIENLLSEYYKYLERAHKQ 283
GD ++ LSE+ K ++A ++
Sbjct: 963 GDQQLDKSLSEWIKEQDKADER 984
>BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p protein.
Length = 1489
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 380 YSSNYDHPKYYRYPYSQHGSFSLFWPSNQNGNYVPNLQRIPKSDVSAY 523
Y NY + Y + ++QH ++ +P NQ+G + QR + ++ Y
Sbjct: 1276 YGQNYHQNQNYHHQHNQHQNY---FPPNQHGQHQQYFQRPKRRELPRY 1320
>BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p protein.
Length = 1489
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 380 YSSNYDHPKYYRYPYSQHGSFSLFWPSNQNGNYVPNLQRIPKSDVSAY 523
Y NY + Y + ++QH ++ +P NQ+G + QR + ++ Y
Sbjct: 1276 YGQNYHQNQNYHHQHNQHQNY---FPPNQHGQHQQYFQRPKRRELPRY 1320
>AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisomerase
III alpha protein.
Length = 1250
Score = 29.9 bits (64), Expect = 3.3
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = +2
Query: 38 FVSAVLAGICKCESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESE 217
F A+LA ES S + I P D I + AD E E VN + ES
Sbjct: 907 FEDAMLAAAESVESSS-QPKTISMVPLDDDIAAAFAADDDAEFEALVN---GGTMPTESN 962
Query: 218 GDDNIENLLSEYYKYLERAHKQ 283
GD ++ LSE+ K ++A ++
Sbjct: 963 GDQQLDKSLSEWIKEQDKADER 984
>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
protein.
Length = 2296
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 380 YSSNYDHPKYYRYPYSQHGSFSLFWPSNQNGNYVPNLQRIPKSDVSAY 523
Y NY + Y + ++QH ++ +P NQ+G + QR + ++ Y
Sbjct: 1276 YGQNYHQNQNYHHQHNQHQNY---FPPNQHGQHQQYFQRPKRRELPRY 1320
>AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-PA
protein.
Length = 1250
Score = 29.9 bits (64), Expect = 3.3
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = +2
Query: 38 FVSAVLAGICKCESDSLEVNDIETSPFYDTIIFSDIADIMNELENNVNVPADVSRDNESE 217
F A+LA ES S + I P D I + AD E E VN + ES
Sbjct: 907 FEDAMLAAAESVESSS-QPKTISMVPLDDDIAAAFAADDDAEFEALVN---GGTMPTESN 962
Query: 218 GDDNIENLLSEYYKYLERAHKQ 283
GD ++ LSE+ K ++A ++
Sbjct: 963 GDQQLDKSLSEWIKEQDKADER 984
>BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p
protein.
Length = 634
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 149 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 304
D + +E+N + D+SR++ ++ +D I + + Y ++ +K+ +AY+ +
Sbjct: 295 DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 347
>BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p
protein.
Length = 634
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 149 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 304
D + +E+N + D+SR++ ++ +D I + + Y ++ +K+ +AY+ +
Sbjct: 295 DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 347
>AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p
protein.
Length = 352
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 149 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 304
D + +E+N + D+SR++ ++ +D I + + Y ++ +K+ +AY+ +
Sbjct: 13 DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 65
>AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA
protein.
Length = 634
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/53 (22%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 149 DIMNELENNVNVPADVSRDNESEGDDNIENLLSEY-YKYLERAHKQQRAYENY 304
D + +E+N + D+SR++ ++ +D I + + Y ++ +K+ +AY+ +
Sbjct: 295 DTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRH 347
>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
protein.
Length = 2146
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 551 SPSNEFKPIYDWIQSQCYCKMNKVPCECDCKQCLN 655
SP N +P+ +Q+QC C NKV +C + C N
Sbjct: 585 SPLNCQEPMV-CVQNQCLCPENKVCNQCATQPCQN 618
>L41642-1|AAA85085.1| 773|Drosophila melanogaster lin19 protein
protein.
Length = 773
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 188 ADVSRDNESEGDDNIE-NLLSEYYKYLERAHKQQRAYENYKSKNEIAFV 331
AD S E E D + N ++EY K++E +++ + SKN ++++
Sbjct: 229 ADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRRGFNSKNGLSYL 277
>AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein.
Length = 748
Score = 28.7 bits (61), Expect = 7.7
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 311 KNEIAFVPQQRQVKAKASVKSGAYSSN-YDHPKYYRYPYSQ--HGSFSLFWPSNQNGNYV 481
+ + F + + V K SV Y N + +++R+ ++ G+ + N NGN
Sbjct: 120 QRRVGFTHRGKPVGPKKSVNDACYMFNKIEAEQFFRHHHNNGNSGNNNGNGSGNDNGNGS 179
Query: 482 PNLQRIPKSDVSAYHDYGMQNKK 550
N ++ P+++ + H QN+K
Sbjct: 180 NNSRKPPRNNKNNRHKSNNQNQK 202
>AF132161-1|AAD34749.1| 972|Drosophila melanogaster unknown
protein.
Length = 972
Score = 28.7 bits (61), Expect = 7.7
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Frame = +2
Query: 17 VMRLLIFFVSAVLAGICKCESDSLEVNDIETSPFYDTI-IFSDI--ADIMNELENNVNVP 187
V+ +L+F VS + I E D+ ++ +SP D FS + D+ +E V +
Sbjct: 59 VLLMLLFLVSCLAYRILSVEQDAPPLDLHRSSPLLDAYEDFSAMRAGDLKMRIEEMVRIK 118
Query: 188 ADVS---RDNESEGDDNIENLLSEYYKYLERAH----KQQRAYENYKSKNEIAFVPQQRQ 346
+ VS R+ ES +++ +S+Y + +E ++Q E K E A V Q+
Sbjct: 119 STVSVELRELESR-RQKLQSDISQYNQKIEELKQELLREQTELERLKISVEQAQVAQREA 177
Query: 347 VK 352
V+
Sbjct: 178 VQ 179
>AE014298-448|AAF45811.2| 626|Drosophila melanogaster CG2681-PA
protein.
Length = 626
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 242 VSSQCYRLLHSHYLC*HPLVHSRYFLIHSLCLLCH 138
V QC R+L LC P +SR + +LC H
Sbjct: 226 VCEQCTRILLMCPLCKEPFTNSRSLTVEALCAKAH 260
>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
isoform A protein.
Length = 2146
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 551 SPSNEFKPIYDWIQSQCYCKMNKVPCECDCKQCLN 655
SP N +P+ +Q+QC C NKV +C + C N
Sbjct: 585 SPLNCQEPMV-CVQNQCLCPENKVCNQCATQPCQN 618
>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
isoform B protein.
Length = 2189
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 551 SPSNEFKPIYDWIQSQCYCKMNKVPCECDCKQCLN 655
SP N +P+ +Q+QC C NKV +C + C N
Sbjct: 628 SPLNCQEPMV-CVQNQCLCPENKVCNQCATQPCQN 661
>AE013599-2818|AAF57601.1| 972|Drosophila melanogaster CG15110-PA
protein.
Length = 972
Score = 28.7 bits (61), Expect = 7.7
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Frame = +2
Query: 17 VMRLLIFFVSAVLAGICKCESDSLEVNDIETSPFYDTI-IFSDI--ADIMNELENNVNVP 187
V+ +L+F VS + I E D+ ++ +SP D FS + D+ +E V +
Sbjct: 59 VLLMLLFLVSCLAYRILSVEQDAPPLDLHRSSPLLDAYEDFSAMRAGDLKMRIEEMVRIK 118
Query: 188 ADVS---RDNESEGDDNIENLLSEYYKYLERAH----KQQRAYENYKSKNEIAFVPQQRQ 346
+ VS R+ ES +++ +S+Y + +E ++Q E K E A V Q+
Sbjct: 119 STVSVELRELESR-RQKLQSDISQYNQKIEELKQELLREQTELERLKISVEQAQVAQREA 177
Query: 347 VK 352
V+
Sbjct: 178 VQ 179
>AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-PA
protein.
Length = 748
Score = 28.7 bits (61), Expect = 7.7
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 311 KNEIAFVPQQRQVKAKASVKSGAYSSN-YDHPKYYRYPYSQ--HGSFSLFWPSNQNGNYV 481
+ + F + + V K SV Y N + +++R+ ++ G+ + N NGN
Sbjct: 120 QRRVGFTHRGKPVGPKKSVNDACYMFNKIEAEQFFRHHHNNGNSGNNNGNGSGNDNGNGS 179
Query: 482 PNLQRIPKSDVSAYHDYGMQNKK 550
N ++ P+++ + H QN+K
Sbjct: 180 NNSRKPPRNNKNNRHKSNNQNQK 202
>AB077850-1|BAB89399.1| 972|Drosophila melanogaster heparan sulfate
GlcNAc transferase-I/II protein.
Length = 972
Score = 28.7 bits (61), Expect = 7.7
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Frame = +2
Query: 17 VMRLLIFFVSAVLAGICKCESDSLEVNDIETSPFYDTI-IFSDI--ADIMNELENNVNVP 187
V+ +L+F VS + I E D+ ++ +SP D FS + D+ +E V +
Sbjct: 59 VLLMLLFLVSCLAYRILSVEQDAPPLDLHRSSPLLDAYEDFSAMRAGDLKMRIEEMVRIK 118
Query: 188 ADVS---RDNESEGDDNIENLLSEYYKYLERAH----KQQRAYENYKSKNEIAFVPQQRQ 346
+ VS R+ ES +++ +S+Y + +E ++Q E K E A V Q+
Sbjct: 119 STVSVELRELESR-RQKLQSDISQYNQKIEELKQELLREQTELERLKISVEQAQVAQREA 177
Query: 347 VK 352
V+
Sbjct: 178 VQ 179
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,894,940
Number of Sequences: 53049
Number of extensions: 573675
Number of successful extensions: 1972
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1969
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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