Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28n11
         (407 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC090048-1|AAH90048.1|   82|Homo sapiens ubiquinol-cytochrome c ...    59   7e-09
BC001390-1|AAH01390.1|   82|Homo sapiens ubiquinol-cytochrome c ...    59   7e-09
D50369-1|BAA23321.1|   93|Homo sapiens low molecular mass ubiqui...    54   2e-07
BC075861-1|AAH75861.2|  322|Homo sapiens chromosome 10 open read...    29   4.6  
AL513355-3|CAH71692.2|  322|Homo sapiens chromosome 10 open read...    29   4.6  
AL356155-3|CAM22929.1|  322|Homo sapiens chromosome 10 open read...    29   4.6  
D70899-1|BAA18934.1|  762|Homo sapiens cGMP-dependent protein ki...    29   6.0  

>BC090048-1|AAH90048.1|   82|Homo sapiens ubiquinol-cytochrome c
           reductase, complex III subunit VII, 9.5kDa protein.
          Length = 82

 Score = 58.8 bits (136), Expect = 7e-09
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = +3

Query: 87  MGKHFGELGFIRGIVYYKMSPHEQKAYAGAITKGIPNFVTRMLATIAYWLPPAIIGTCIY 266
           MG+ FG L  +R ++ Y +SP EQ+AY    TKGIPN + R+  +    +P  ++   IY
Sbjct: 1   MGREFGNLTRMRHVISYSLSPFEQRAYPHVFTKGIPNVLRRIRESFFRVVPQFVVFYLIY 60

Query: 267 KYVEEAHHASLRKDPRDFMDE 329
            +  E    S RK+P  + ++
Sbjct: 61  TWGTEEFERSKRKNPAAYEND 81


>BC001390-1|AAH01390.1|   82|Homo sapiens ubiquinol-cytochrome c
           reductase, complex III subunit VII, 9.5kDa protein.
          Length = 82

 Score = 58.8 bits (136), Expect = 7e-09
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = +3

Query: 87  MGKHFGELGFIRGIVYYKMSPHEQKAYAGAITKGIPNFVTRMLATIAYWLPPAIIGTCIY 266
           MG+ FG L  +R ++ Y +SP EQ+AY    TKGIPN + R+  +    +P  ++   IY
Sbjct: 1   MGREFGNLTRMRHVISYSLSPFEQRAYPHVFTKGIPNVLRRIRESFFRVVPQFVVFYLIY 60

Query: 267 KYVEEAHHASLRKDPRDFMDE 329
            +  E    S RK+P  + ++
Sbjct: 61  TWGTEEFERSKRKNPAAYEND 81


>D50369-1|BAA23321.1|   93|Homo sapiens low molecular mass
           ubiquinone-binding protein protein.
          Length = 93

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/73 (35%), Positives = 40/73 (54%)
 Frame = +3

Query: 87  MGKHFGELGFIRGIVYYKMSPHEQKAYAGAITKGIPNFVTRMLATIAYWLPPAIIGTCIY 266
           MG+ FG L  +R ++ Y +SP EQ+AY    TKGIPN + R+  +    +P  ++   IY
Sbjct: 1   MGREFGNLTRMRHVISYSLSPFEQRAYPHVFTKGIPNVLRRIRESFFRVVPQFVVFYLIY 60

Query: 267 KYVEEAHHASLRK 305
            +  E    S R+
Sbjct: 61  TWGTEEFERSKRR 73


>BC075861-1|AAH75861.2|  322|Homo sapiens chromosome 10 open reading
           frame 130 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = -1

Query: 254 SDYCRW*PVRNCC*HSCHKIGDSFCNCTSIGFLFMWRHFIINNSSNETQFTEMFSHSEFS 75
           ++Y  W P        C+K  D FC   S+  LF  R+   N   N T     F +S+ S
Sbjct: 186 NEYLLWNPSTG----QCYKQFDPFCPLKSVDCLFDDRNVWFNIQQNNTPMAVFFDYSKES 241

Query: 74  LIK 66
             K
Sbjct: 242 FWK 244


>AL513355-3|CAH71692.2|  322|Homo sapiens chromosome 10 open reading
           frame 130 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = -1

Query: 254 SDYCRW*PVRNCC*HSCHKIGDSFCNCTSIGFLFMWRHFIINNSSNETQFTEMFSHSEFS 75
           ++Y  W P        C+K  D FC   S+  LF  R+   N   N T     F +S+ S
Sbjct: 186 NEYLLWNPSTG----QCYKQFDPFCPLKSVDCLFDDRNVWFNIQQNNTPMAVFFDYSKES 241

Query: 74  LIK 66
             K
Sbjct: 242 FWK 244


>AL356155-3|CAM22929.1|  322|Homo sapiens chromosome 10 open reading
           frame 130 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = -1

Query: 254 SDYCRW*PVRNCC*HSCHKIGDSFCNCTSIGFLFMWRHFIINNSSNETQFTEMFSHSEFS 75
           ++Y  W P        C+K  D FC   S+  LF  R+   N   N T     F +S+ S
Sbjct: 186 NEYLLWNPSTG----QCYKQFDPFCPLKSVDCLFDDRNVWFNIQQNNTPMAVFFDYSKES 241

Query: 74  LIK 66
             K
Sbjct: 242 FWK 244


>D70899-1|BAA18934.1|  762|Homo sapiens cGMP-dependent protein
           kinase II protein.
          Length = 762

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/66 (24%), Positives = 37/66 (56%)
 Frame = +1

Query: 1   DLSKSIQKKDRAKLIKEKVVLNLIKENSEWENISVNWVSLEELFIIKCLHMNKKPMLVQL 180
           +L + +++KD A++ + +  L  ++E+   + +++    L E    KC+ +NK   +V +
Sbjct: 32  ELERELRRKD-AEIQEREYHLKELREHGSKQTVAI--AELTEELQNKCIQLNKLQDVVHM 88

Query: 181 QKESPI 198
           Q  SP+
Sbjct: 89  QGGSPL 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,682,539
Number of Sequences: 237096
Number of extensions: 1111873
Number of successful extensions: 2687
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2687
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)