Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28n10
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 82 4e-16
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 82 4e-16
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z77656-5|CAH04702.1| 308|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 5.7
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 5.7
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 81.8 bits (193), Expect = 4e-16
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Frame = +1
Query: 196 NNIRALGVLWNPITDNLGFRSGLGETFPNPLTKRKVLCHLMRVYDPLGLLAPIVVKGRIL 375
+ I+ LG W+ I D F + + TKR+V + +DPLGL+ PI+V ++L
Sbjct: 1328 HKIKMLGYDWDSIGDT--FIIKIVRPDEDHPTKREVASKMAATFDPLGLVTPIIVHFKLL 1385
Query: 376 FQQTWRPNVDWDTEFQPTEALRWSDWFQELSKVTSLEIPRWYSNSKNSEPTQRELHVFAD 555
QQ W V W T+ W +E+ + + +PR +N + E + VF+D
Sbjct: 1386 IQQIWESKVTWKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYDYESV--NILVFSD 1442
Query: 556 ASELAYACVAYWRLLYSDGSIELSLISSKARVTP--LKPISIPRLELQA 696
AS+ YA Y + Y D + L++SK ++ P ++IP++EL A
Sbjct: 1443 ASKDIYATTIYLQYQYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLA 1491
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 81.8 bits (193), Expect = 4e-16
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Frame = +1
Query: 196 NNIRALGVLWNPITDNLGFRSGLGETFPNPLTKRKVLCHLMRVYDPLGLLAPIVVKGRIL 375
+ I+ LG W+ I D F + + TKR+V + +DPLGL+ PI+V ++L
Sbjct: 1328 HKIKMLGYDWDSIGDT--FIIKIVRPDEDHPTKREVASKMAATFDPLGLVTPIIVHFKLL 1385
Query: 376 FQQTWRPNVDWDTEFQPTEALRWSDWFQELSKVTSLEIPRWYSNSKNSEPTQRELHVFAD 555
QQ W V W T+ W +E+ + + +PR +N + E + VF+D
Sbjct: 1386 IQQIWESKVTWKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYDYESV--NILVFSD 1442
Query: 556 ASELAYACVAYWRLLYSDGSIELSLISSKARVTP--LKPISIPRLELQA 696
AS+ YA Y + Y D + L++SK ++ P ++IP++EL A
Sbjct: 1443 ASKDIYATTIYLQYQYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLA 1491
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical protein
K06C4.15 protein.
Length = 1067
Score = 62.9 bits (146), Expect = 2e-10
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Frame = +1
Query: 190 SANNIRALGVLWN--PITDNLGFRSGLGETFPNPLTKRKVLCHLMRVYDPLGLLAPIVVK 363
S I+ LG+ WN P D + +T +P TKR V + +DPLGL++PI V
Sbjct: 868 SDRTIKLLGMKWNSSPDADTYTIKIADVQTIMHP-TKRDVASKMAETFDPLGLISPIQVL 926
Query: 364 GRILFQQTWRPNVDWDTEFQPTEALRWSDW--FQELSKVTSLEIPRWYSNSKNSEPTQRE 537
+ Q + V+W P L DW Q ++ +PR + + E + +
Sbjct: 927 MKRFIQ---KHEVNWKDPI-PKHLL--DDWQAIQASFIDRTITVPRRLTT--DFEYKEIQ 978
Query: 538 LHVFADASELAYACVAYWRLLYSDGSIE-LSLISSKARVTPLKPI--SIPRLEL 690
L +F+DAS+ YA AY Y D +SLI+SK ++ P K +IP+LEL
Sbjct: 979 LLIFSDASQDIYAAAAYAYFSYGDDRPPVISLITSKNKIKPSKETNWTIPKLEL 1032
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 54.0 bits (124), Expect = 1e-07
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 8/221 (3%)
Frame = +1
Query: 58 IVAVHND--AYFEMRGWISNDPSALKFIPADLRATQPSLEINLGSC---SANNIRALGVL 222
I+A +D A F++ + + L + ++ S L C S + ++ LGV
Sbjct: 352 IIATDDDSEAMFKLYNKVKTVFNGLSMNIREFQSNDQSFTDLLDECDKTSESEVKVLGVK 411
Query: 223 WNPITDNLGFRSGLGETFPNPLTKRKVLCHLMRVYDPLGLLAPIVVKGRILFQQTW--RP 396
W+ TD + + + N ++R V + +YDP+GLL P+++ ++ ++ W
Sbjct: 412 WSTKTDQITSSTTDIDILEN--SRRTVSSAIASIYDPMGLLVPLLLPLKLFQRKLWIEEE 469
Query: 397 NVDWDTEFQPTEALRWSDWFQELSKVTSLEIPRWYSNSKNSEPTQRELHVFADASELAYA 576
WDT + + + + S + R + K+ E E+ FADAS+ A A
Sbjct: 470 KYGWDTPLKEKHEKEYKSITDNI-RGFSKDFNR-HIIDKSGE---NEIIAFADASQEAIA 524
Query: 577 CVAYWRLLYSDGSIELSLISSKARVTPLK-PISIPRLELQA 696
Y + Y ++L+ K+ V LK +IP+LE+QA
Sbjct: 525 ACIYVKNKYG-----VNLLFGKSNVKSLKEKWTIPKLEVQA 560
>Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical
protein F15D4.5 protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -1
Query: 440 LNASVGWNSVSQSTLGLHVC-*NKIRPLTTIGANKPNGSYTRMR*QRTLRFVRGFGNVSP 264
+N++ WN+ +Q + HVC + I P ++P+G Y + + + V GNV+P
Sbjct: 294 INSNKDWNNNTQEAINRHVCHLSTILPRMEAALHQPSGYYVQYQQENP---VTKQGNVAP 350
Query: 263 K-PERNP 246
K E NP
Sbjct: 351 KWNEYNP 357
>Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical
protein K09E4.4 protein.
Length = 715
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 448 DWFQELSKVTSLEIPRWYSNSKNSEPTQRELHVF 549
+ FQ+L ++ ++ +W N+K+ PT E VF
Sbjct: 610 EMFQKLESYSNRDVRQWIENAKSIAPTSEERQVF 643
>Z77656-5|CAH04702.1| 308|Caenorhabditis elegans Hypothetical
protein F07B10.6 protein.
Length = 308
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 58 IVAVHNDAYFEMRGWISNDPSALKFIPADLRATQPSLEINLGSCSANNIRALGVLWNPIT 237
IV V+ YF +RG+ D + ++++ + T + I + + N ALGV+ + T
Sbjct: 180 IVIVYAYTYFVLRGYKERDANRMRYVFKSIALTVIVVLIGWTTVTIGNTIALGVIEDRHT 239
Query: 238 DN-LGFRSGLG 267
+ +G G
Sbjct: 240 SEIISIHAGFG 250
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 394 PNVDWDTEFQPTEALRWSDWFQELSKVTSLEIPRWYSNSKNSEPTQRELH-VFADAS 561
P +DW TE + R SDW + + + + E T R+ + +F D S
Sbjct: 192 PKLDWKTESIRIKRTRMSDWMDAEQRDVMRQFDEVIRSEEEDERTSRKRNGIFKDGS 248
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 394 PNVDWDTEFQPTEALRWSDWFQELSKVTSLEIPRWYSNSKNSEPTQRELH-VFADAS 561
P +DW TE + R SDW + + + + E T R+ + +F D S
Sbjct: 192 PKLDWKTESIRIKRTRMSDWMDAEQRDVMRQFDEVIRSEEEDERTSRKRNGIFKDGS 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,743,570
Number of Sequences: 27780
Number of extensions: 367318
Number of successful extensions: 833
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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