Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28n09
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical...    69   4e-12
Z81120-6|CAH10814.1|   98|Caenorhabditis elegans Hypothetical pr...    34   0.11 
U13019-12|AAC24448.1|  316|Caenorhabditis elegans Serpentine rec...    29   2.4  
U58754-6|AAK72081.1|  325|Caenorhabditis elegans Serpentine rece...    28   7.2  
AC087078-1|AAG37943.1|  198|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF016678-1|AAB66151.1|  159|Caenorhabditis elegans Hypothetical ...    27   9.6  

>AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical
           protein Y105E8A.11 protein.
          Length = 106

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 30/73 (41%), Positives = 47/73 (64%)
 Frame = +3

Query: 321 EQQLTDALKKAMPGITYISVQDISGGCGAMFEISVEAKEFVGLNRVKQHRLVTDSLKNEI 500
           E +++  L + + G T + V D+S GCG+MF++ VEA  F G ++V QH+ VT  L+ +I
Sbjct: 34  ELKMSKLLTEGIDGCTRVEVHDVSNGCGSMFDVVVEAAGFKGKSKVAQHKQVTSILREQI 93

Query: 501 AEMHGIRIHTTPA 539
            +MHG+ I T  A
Sbjct: 94  KDMHGLTIKTKAA 106


>Z81120-6|CAH10814.1|   98|Caenorhabditis elegans Hypothetical
           protein T12D8.10 protein.
          Length = 98

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +3

Query: 330 LTDALKKAMPGITYISVQDISGGC-GAMFEISVEAKEFVGLNRVKQHRLVTDSLKNEIAE 506
           LT+A+K   P I  + V D SGGC G  F + + ++ F G   ++ HRLV  +L   + E
Sbjct: 12  LTEAIK---PQI--LKVVDESGGCDGYKFRLLIVSEAFEGKCTLQSHRLVQAALAPIMDE 66

Query: 507 MHGIRI 524
            H + I
Sbjct: 67  THALTI 72


>U13019-12|AAC24448.1|  316|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 8 protein.
          Length = 316

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 621 FMYFFQKFVISENLDAISLFSNIL-IAWRPASCEYGCHAFLLFHSSENLLLI 469
           F YF Q   ++    A+ L+S IL + W      YG H F + +S   L+L+
Sbjct: 25  FKYFVQVAYLAP---AVFLYSRILYVVWVQHKKSYGYHPFFMVYSMVGLILV 73


>U58754-6|AAK72081.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 12 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = -2

Query: 627 CIFMYFFQKFVISENLDAISLFSNILIAWRPASCEYGCHAFLLF--HSSENLLL 472
           C+F +F Q+ +I   +    + +     W P +C +G    L F  HS  +LLL
Sbjct: 56  CMFDFFVQQRLIPTGMTLAYVSNGFCKHWGPRTCFFGYSLMLHFLSHSLWSLLL 109


>AC087078-1|AAG37943.1|  198|Caenorhabditis elegans Hypothetical
           protein Y34F4.2 protein.
          Length = 198

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = -2

Query: 633 NNCIFMYFFQKFVISENLDAISLFSNILIAWRPASCEYGCHAFLLFHSSENLLLICVVSL 454
           +N IF+Y+F+   + ++L    +   +   W P S +   +  LL    +NL+++  + L
Sbjct: 26  SNSIFIYYFKPVWVEKHLANFGIDLGVPYWWGP-SAKVAVYTCLLSSIGQNLVVVAYIFL 84


>AF016678-1|AAB66151.1|  159|Caenorhabditis elegans Hypothetical
           protein K07E8.6 protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 612 FFQKFVISENLDAISLFSN 556
           FF+KF +SENLD +  F +
Sbjct: 80  FFKKFEVSENLDEVKAFKS 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,857,513
Number of Sequences: 27780
Number of extensions: 311212
Number of successful extensions: 791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)