Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28n07
(579 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-319|AAF51979.2| 773|Drosophila melanogaster CG1250-PB,... 287 1e-77
AE014297-318|AAF51978.2| 773|Drosophila melanogaster CG1250-PA,... 287 1e-77
BT001619-1|AAN71374.1| 773|Drosophila melanogaster RE35250p pro... 285 3e-77
AJ276482-1|CAB81549.1| 769|Drosophila melanogaster putative Sec... 283 9e-77
BT003759-1|AAO41438.1| 852|Drosophila melanogaster RE70550p pro... 41 0.001
AE013599-960|AAF58880.1| 1184|Drosophila melanogaster CG1472-PA ... 41 0.001
AY119060-1|AAM50920.1| 477|Drosophila melanogaster LP07366p pro... 29 6.0
AY069265-1|AAL39410.1| 307|Drosophila melanogaster GM07762p pro... 29 6.0
AE013599-536|AAF59171.3| 477|Drosophila melanogaster CG8791-PA ... 29 6.0
AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA... 28 7.9
>AE014297-319|AAF51979.2| 773|Drosophila melanogaster CG1250-PB,
isoform B protein.
Length = 773
Score = 287 bits (703), Expect = 1e-77
Identities = 123/139 (88%), Positives = 132/139 (94%)
Frame = +2
Query: 161 MATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVL 340
M TYEEFIQQNEDRDG+R TWNVWPSSRIEA+RLVVPLACLYQPLKERPDLPPIQYEPVL
Sbjct: 1 MTTYEEFIQQNEDRDGVRLTWNVWPSSRIEASRLVVPLACLYQPLKERPDLPPIQYEPVL 60
Query: 341 CTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEYT 520
CTR+ CRAILNP+CQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIP FSTIEYT
Sbjct: 61 CTRSNCRAILNPLCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPGFSTIEYT 120
Query: 521 ITRAQAMPPIYLLVVDTCL 577
ITRA MPP+++ +VDTC+
Sbjct: 121 ITRAPTMPPVFIFLVDTCM 139
>AE014297-318|AAF51978.2| 773|Drosophila melanogaster CG1250-PA,
isoform A protein.
Length = 773
Score = 287 bits (703), Expect = 1e-77
Identities = 123/139 (88%), Positives = 132/139 (94%)
Frame = +2
Query: 161 MATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVL 340
M TYEEFIQQNEDRDG+R TWNVWPSSRIEA+RLVVPLACLYQPLKERPDLPPIQYEPVL
Sbjct: 1 MTTYEEFIQQNEDRDGVRLTWNVWPSSRIEASRLVVPLACLYQPLKERPDLPPIQYEPVL 60
Query: 341 CTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEYT 520
CTR+ CRAILNP+CQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIP FSTIEYT
Sbjct: 61 CTRSNCRAILNPLCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPGFSTIEYT 120
Query: 521 ITRAQAMPPIYLLVVDTCL 577
ITRA MPP+++ +VDTC+
Sbjct: 121 ITRAPTMPPVFIFLVDTCM 139
>BT001619-1|AAN71374.1| 773|Drosophila melanogaster RE35250p
protein.
Length = 773
Score = 285 bits (699), Expect = 3e-77
Identities = 122/139 (87%), Positives = 131/139 (94%)
Frame = +2
Query: 161 MATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVL 340
M TYEEFIQQNEDRDG+R TWNVWPSSRIEA+RLVVPLACLYQPLKERPDLPPIQYEPVL
Sbjct: 1 MTTYEEFIQQNEDRDGVRLTWNVWPSSRIEASRLVVPLACLYQPLKERPDLPPIQYEPVL 60
Query: 341 CTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEYT 520
CTR+ CRAILNP+CQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIP FSTIEYT
Sbjct: 61 CTRSNCRAILNPLCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPGFSTIEYT 120
Query: 521 ITRAQAMPPIYLLVVDTCL 577
ITR MPP+++ +VDTC+
Sbjct: 121 ITRTPTMPPVFIFLVDTCM 139
>AJ276482-1|CAB81549.1| 769|Drosophila melanogaster putative Sec23
protein protein.
Length = 769
Score = 283 bits (695), Expect = 9e-77
Identities = 122/139 (87%), Positives = 131/139 (94%)
Frame = +2
Query: 161 MATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVL 340
M TYEEFIQQNEDRDG+R TWNVWPSSRIEA+RLVVPLACLYQPLKERPDLPPIQYEPVL
Sbjct: 1 MTTYEEFIQQNEDRDGVRLTWNVWPSSRIEASRLVVPLACLYQPLKERPDLPPIQYEPVL 60
Query: 341 CTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEYT 520
CTR+ CRAILNP+CQVDYRAKLWVCNFCFQRN FPPQYAAISEQHQPAELIP FSTIEYT
Sbjct: 61 CTRSNCRAILNPLCQVDYRAKLWVCNFCFQRNQFPPQYAAISEQHQPAELIPGFSTIEYT 120
Query: 521 ITRAQAMPPIYLLVVDTCL 577
ITRA MPP+++ +VDTC+
Sbjct: 121 ITRAPTMPPVFIFLVDTCM 139
>BT003759-1|AAO41438.1| 852|Drosophila melanogaster RE70550p
protein.
Length = 852
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 209 IRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQ- 385
+R T P S + +PL + P ++ LP IQ ++ R CR +NP
Sbjct: 135 MRCTLTKIPESNSLLQKSRLPLGIVIHPFRDVNSLPVIQCINIVRCR-LCRTYINPFVYF 193
Query: 386 VDYRAKLWVCNFCFQRNPFPPQY 454
VD +K+W CN C++ N P +
Sbjct: 194 VD--SKMWKCNLCYRVNELPDDF 214
>AE013599-960|AAF58880.1| 1184|Drosophila melanogaster CG1472-PA
protein.
Length = 1184
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 209 IRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQ- 385
+R T P S + +PL + P ++ LP IQ ++ R CR +NP
Sbjct: 467 MRCTLTKIPESNSLLQKSRLPLGIVIHPFRDVNSLPVIQCINIVRCR-LCRTYINPFVYF 525
Query: 386 VDYRAKLWVCNFCFQRNPFPPQY 454
VD +K+W CN C++ N P +
Sbjct: 526 VD--SKMWKCNLCYRVNELPDDF 546
>AY119060-1|AAM50920.1| 477|Drosophila melanogaster LP07366p
protein.
Length = 477
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 298 GAPRPTTDTVRACTLYTKYMQSYIEPNVPGGLQS*IMGLQLLLPTKPISTSICCY 462
GAP T DT + + + Y+ VP GL + G +L+L I C+
Sbjct: 52 GAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGGILCF 106
>AY069265-1|AAL39410.1| 307|Drosophila melanogaster GM07762p
protein.
Length = 307
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 298 GAPRPTTDTVRACTLYTKYMQSYIEPNVPGGLQS*IMGLQLLLPTKPISTSICCY 462
GAP T DT + + + Y+ VP GL + G +L+L I C+
Sbjct: 24 GAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGGILCF 78
>AE013599-536|AAF59171.3| 477|Drosophila melanogaster CG8791-PA
protein.
Length = 477
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 298 GAPRPTTDTVRACTLYTKYMQSYIEPNVPGGLQS*IMGLQLLLPTKPISTSICCY 462
GAP T DT + + + Y+ VP GL + G +L+L I C+
Sbjct: 52 GAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGGILCF 106
>AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA
protein.
Length = 1537
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 363 ALHVFRVQSTGSYCIGGRSGRSLSGWYKQAKGTTSLVAS 247
+LH FR +STG+ G+ G +++ + G +S AS
Sbjct: 1477 SLHNFRTRSTGTGAAAGKPGAAVTSAAATSAGASSAAAS 1515
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,198,406
Number of Sequences: 53049
Number of extensions: 656401
Number of successful extensions: 1694
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -