Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28n06
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029559-1|AAH29559.1| 213|Homo sapiens chromosome 14 open read... 71 4e-12
AK096173-1|BAC04716.1| 213|Homo sapiens protein ( Homo sapiens ... 71 4e-12
AL392172-8|CAO03437.1| 158|Homo sapiens novel transcript protein. 59 1e-08
AL392172-7|CAO03436.1| 100|Homo sapiens novel transcript protein. 46 1e-04
AL392172-6|CAO03435.1| 99|Homo sapiens novel transcript protein. 43 0.001
CR541816-1|CAG46615.1| 283|Homo sapiens RPP38 protein. 32 2.3
BC029494-1|AAH29494.1| 283|Homo sapiens ribonuclease P/MRP 38kD... 32 2.3
AL590365-13|CAH73969.1| 167|Homo sapiens ribonuclease P (38kD) ... 32 2.3
AL590365-12|CAH73968.1| 283|Homo sapiens ribonuclease P (38kD) ... 32 2.3
AL590365-11|CAH73967.1| 169|Homo sapiens ribonuclease P (38kD) ... 32 2.3
AK223418-1|BAD97138.1| 283|Homo sapiens ribonuclease P/MRP 38kD... 32 2.3
BC012745-1|AAH12745.1| 1297|Homo sapiens ribosomal RNA processin... 31 4.0
AL355490-8|CAI40776.1| 1197|Homo sapiens KIAA0690 protein. 31 4.0
AL355490-7|CAI40777.1| 1297|Homo sapiens KIAA0690 protein. 31 4.0
AB014590-1|BAA31665.1| 1214|Homo sapiens KIAA0690 protein protein. 31 4.0
U77664-1|AAC51142.1| 283|Homo sapiens RNaseP protein P38 protein. 30 7.0
>BC029559-1|AAH29559.1| 213|Homo sapiens chromosome 14 open reading
frame 24 protein.
Length = 213
Score = 70.9 bits (166), Expect = 4e-12
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 141 PTRVLHFSDGV---DXXXXXXXXXXXXXXXXXANVDPKTLSWLPWLTHYANTSGTKVLNA 311
P RV+HF G + VDP L+W P+L Y + T L+
Sbjct: 54 PRRVIHFVSGETMEEYSTDEDEVDGLEKKDVLPTVDPTKLTWGPYLWFYMLRAATSTLSV 113
Query: 312 IDYTGESLANFFGITTPKYQLEIDEYERLKEEKKKMEDES 431
D+ GE +A+ GI+TPKYQ IDEY R+K+E+++ E+E+
Sbjct: 114 CDFLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEEN 153
>AK096173-1|BAC04716.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ38854 fis, clone MESAN2010664. ).
Length = 213
Score = 70.9 bits (166), Expect = 4e-12
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 141 PTRVLHFSDGV---DXXXXXXXXXXXXXXXXXANVDPKTLSWLPWLTHYANTSGTKVLNA 311
P RV+HF G + VDP L+W P+L Y + T L+
Sbjct: 54 PRRVIHFVSGETMEEYSTDEDEVDGLEKKDVLPTVDPTKLTWGPYLWFYMLRAATSTLSV 113
Query: 312 IDYTGESLANFFGITTPKYQLEIDEYERLKEEKKKMEDES 431
D+ GE +A+ GI+TPKYQ IDEY R+K+E+++ E+E+
Sbjct: 114 CDFLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEEN 153
>AL392172-8|CAO03437.1| 158|Homo sapiens novel transcript protein.
Length = 158
Score = 59.3 bits (137), Expect = 1e-08
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +3
Query: 93 FEMASNENSQIKLNIQPTRVLHFSDG---VDXXXXXXXXXXXXXXXXXANVDPKTLSWLP 263
F+ E S P R++HF DG + + +DP LSW P
Sbjct: 6 FQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLSWGP 65
Query: 264 WLTHYANTSGTKVLNAIDYTGESLANFFGITTPKYQLEIDEYERLKEEKKKMEDESAGWV 443
+L +A + + ++ G A FFG+T PKYQ ++E+ R++ +K + E G
Sbjct: 66 YLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPKYQYVLNEFYRIQNKKSDNKSERRG-- 123
Query: 444 PKNSGGDIP 470
K ++P
Sbjct: 124 SKAQAAEVP 132
>AL392172-7|CAO03436.1| 100|Homo sapiens novel transcript protein.
Length = 100
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +3
Query: 93 FEMASNENSQIKLNIQPTRVLHFSDG---VDXXXXXXXXXXXXXXXXXANVDPKTLSWLP 263
F+ E S P R++HF DG + + +DP LSW P
Sbjct: 6 FQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLSWGP 65
Query: 264 WLTHYANTSGTKVLNAIDYTGESLANFFGITTPKY 368
+L +A + + ++ G A FFG+T PKY
Sbjct: 66 YLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPKY 100
>AL392172-6|CAO03435.1| 99|Homo sapiens novel transcript protein.
Length = 99
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +3
Query: 93 FEMASNENSQIKLNIQPTRVLHFSDG---VDXXXXXXXXXXXXXXXXXANVDPKTLSWLP 263
F+ E S P R++HF DG + + +DP LSW P
Sbjct: 6 FQQLDLEKSVPSKKTTPKRIIHFVDGDIMEEYSTEEEEEEEKEEQSTNSTLDPSKLSWGP 65
Query: 264 WLTHYANTSGTKVLNAIDYTGESLANFFGITTPK 365
+L +A + + ++ G A FFG+T PK
Sbjct: 66 YLRFWAGRIASTSFSTCEFLGGRFAVFFGLTQPK 99
>CR541816-1|CAG46615.1| 283|Homo sapiens RPP38 protein.
Length = 283
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 363 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQE 512
K + +D E LKE+K + + +GW P + + + +NE + + R+E
Sbjct: 79 KCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRE 128
>BC029494-1|AAH29494.1| 283|Homo sapiens ribonuclease P/MRP 38kDa
subunit protein.
Length = 283
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 363 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQE 512
K + +D E LKE+K + + +GW P + + + +NE + + R+E
Sbjct: 79 KCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRE 128
>AL590365-13|CAH73969.1| 167|Homo sapiens ribonuclease P (38kD)
(RPP38) protein.
Length = 167
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 363 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQE 512
K + +D E LKE+K + + +GW P + + + +NE + + R+E
Sbjct: 79 KCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRE 128
>AL590365-12|CAH73968.1| 283|Homo sapiens ribonuclease P (38kD)
(RPP38) protein.
Length = 283
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 363 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQE 512
K + +D E LKE+K + + +GW P + + + +NE + + R+E
Sbjct: 79 KCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRE 128
>AL590365-11|CAH73967.1| 169|Homo sapiens ribonuclease P (38kD)
(RPP38) protein.
Length = 169
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 363 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQE 512
K + +D E LKE+K + + +GW P + + + +NE + + R+E
Sbjct: 79 KCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRE 128
>AK223418-1|BAD97138.1| 283|Homo sapiens ribonuclease P/MRP 38kDa
subunit variant protein.
Length = 283
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 363 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQE 512
K + +D E LKE+K + + +GW P + + + +NE + + R+E
Sbjct: 79 KCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRE 128
>BC012745-1|AAH12745.1| 1297|Homo sapiens ribosomal RNA processing 12
homolog (S. cerevisiae) protein.
Length = 1297
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 324 GESLANFFGITTPKYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEP 488
G+S+ + + E +E R KE++K S W+ K GGD PL +P
Sbjct: 1070 GDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWL-KEGGGDEPLNFLDP 1123
>AL355490-8|CAI40776.1| 1197|Homo sapiens KIAA0690 protein.
Length = 1197
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 324 GESLANFFGITTPKYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEP 488
G+S+ + + E +E R KE++K S W+ K GGD PL +P
Sbjct: 970 GDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWL-KEGGGDEPLNFLDP 1023
>AL355490-7|CAI40777.1| 1297|Homo sapiens KIAA0690 protein.
Length = 1297
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 324 GESLANFFGITTPKYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEP 488
G+S+ + + E +E R KE++K S W+ K GGD PL +P
Sbjct: 1070 GDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWL-KEGGGDEPLNFLDP 1123
>AB014590-1|BAA31665.1| 1214|Homo sapiens KIAA0690 protein protein.
Length = 1214
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 324 GESLANFFGITTPKYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEP 488
G+S+ + + E +E R KE++K S W+ K GGD PL +P
Sbjct: 987 GDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWL-KEGGGDEPLNFLDP 1040
>U77664-1|AAC51142.1| 283|Homo sapiens RNaseP protein P38 protein.
Length = 283
Score = 30.3 bits (65), Expect = 7.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 363 KYQLEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLVLNEPGKDVTRQE 512
K + +D + LKE+K + + +GW P + + + +NE + + R+E
Sbjct: 79 KCSIAVDISDNLKEKKTDAKQQVSGWTPAHVRKQLVIGVNEVTRALERRE 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,795,493
Number of Sequences: 237096
Number of extensions: 1568125
Number of successful extensions: 3199
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3199
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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