Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28n02
(661 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 34 0.087
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 34 0.12
07_03_0798 - 21581718-21581724,21582642-21582934 33 0.27
02_01_0483 - 3467813-3467873,3468072-3468154,3468505-3468579,346... 31 0.61
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 31 0.81
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 29 2.5
11_06_0724 - 26696401-26696703,26696875-26697025,26697115-266971... 29 2.5
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357... 29 2.5
03_06_0316 + 33091194-33091370,33091451-33092155 29 2.5
11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617 29 3.3
09_03_0067 - 12035991-12036389,12036928-12037071,12037917-120379... 29 3.3
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 29 3.3
06_01_0226 - 1730931-1731527,1732290-1732469 29 3.3
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216... 29 3.3
10_02_0071 + 4928899-4929465 29 4.3
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 4.3
12_01_0552 + 4469009-4469080,4470052-4470117,4470808-4470941,447... 28 5.7
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 28 5.7
06_03_0234 + 18555036-18555264,18559110-18559234,18559506-18559925 28 5.7
05_06_0066 + 25307863-25307871,25308431-25308570,25308712-253087... 28 5.7
01_01_0051 + 389051-389623 28 5.7
01_06_1050 + 34125087-34126001,34126082-34126639 28 7.6
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 34.3 bits (75), Expect = 0.087
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 283 DEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRL 462
+EQ L ++ +E + + E + R+RR+ ++ E+A R A+ A A R+
Sbjct: 531 EEQRKLERDREEELEREREMMRRREHEERKRREKER-EARHIVEKAMREARERAAAEARM 589
Query: 463 -ANESPEQRATR--LKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANE 609
A QRA R +++ + A +R ++E RE R A+ +A A R+A E
Sbjct: 590 QAEREARQRAERAAVQKAAAEARERAAAEARE----RAAKAAAEAKERVAEE 637
>02_04_0513 -
23569212-23569675,23569759-23569801,23569888-23570000,
23570099-23570158,23570472-23570541,23570887-23570951,
23571548-23571685,23571764-23573015
Length = 734
Score = 33.9 bits (74), Expect = 0.12
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Frame = +1
Query: 286 EQETLNTVEPVDMIQEMDPLSLL----EPKARRRRKGSGPKSETSEERAARLAKM-SAYA 450
EQE + + PVD I+ D + L E K + S P + S ++ R A + S YA
Sbjct: 495 EQEKSDVISPVDAIRPADDVELREQDNESKPAPEGENSKPDRQVSPDKLLRAALLRSRYA 554
Query: 451 -----AQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETP 615
AQ + ++ +++ L+++ + RL +E R A A A R+ E
Sbjct: 555 DVIVKAQGILSQGGDKQ-EELEKLQKEEKARLLAEGNAAMEARRAEAEAEAKRKRDLERE 613
Query: 616 AQRQA 630
RQA
Sbjct: 614 KARQA 618
>07_03_0798 - 21581718-21581724,21582642-21582934
Length = 99
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +1
Query: 313 PVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRAT 492
PVD E +P ++ P +RRR+ SGP + + +++ +A A+ A P R T
Sbjct: 17 PVDQAAEEEPAAVAPPAEKRRRRPSGPAWKPT---LGAISEDAAVASSAAAKAKPAAR-T 72
Query: 493 RLKRMSEYAA 522
+ K + AA
Sbjct: 73 KAKAKGKAAA 82
>02_01_0483 -
3467813-3467873,3468072-3468154,3468505-3468579,
3468728-3468782,3470595-3470950
Length = 209
Score = 31.5 bits (68), Expect = 0.61
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = +1
Query: 283 DEQETLNTVEPVDMIQEMDPLSLLEPKARR-------RRKGSGPKSETSEERAARLAKMS 441
DEQ++ E D + PLS + + RR R+G KSET EE AAR
Sbjct: 19 DEQQSKEEEEEADTKEGSCPLSRINGRRRRSANIRKGERRGGEWKSETYEEEAARGEGSG 78
Query: 442 AYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQR 555
+ Q ++R R +R + + + + + Q+
Sbjct: 79 VLSGQTNEIVGEKKRRRRARRDTNESGEAIRDGSEGQK 116
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 355 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLA 465
E K +R+R+G G + SE AA+L MS Q LA
Sbjct: 67 EDKRKRKRRGDGEDVDNSESDAAKLEGMSYRELQALA 103
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +1
Query: 364 ARRRRKGSGPKSETSEERAARLA---KMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 534
AR R+G T ++R+ A K + R+ E P +L E +
Sbjct: 531 ARAGREGYAVTFVTDDDRSLLKAIAKKAGSQLKSRIVAEKPVAECAKLIEELEDQISTII 590
Query: 535 SETREQRAIRLARMSAYAARRL 600
E RE+R +R A M A A +
Sbjct: 591 QEEREERILRKAEMEATKAENM 612
>11_06_0724 -
26696401-26696703,26696875-26697025,26697115-26697184,
26697526-26697736,26697928-26698085,26698684-26699500
Length = 569
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -3
Query: 491 VARCSGDSFASLC-----AAYADILASRAALSSDVSLFGPEPFLR 372
VA C GD+ AS C AAYA A LS D ++F E LR
Sbjct: 80 VALCRGDANASACSGCVDAAYAAATARLCPLSKDAAVFYDECALR 124
>10_01_0326 +
3574129-3574329,3575144-3575692,3575914-3576072,
3576349-3577543,3577626-3577762,3578052-3578242,
3578888-3579218
Length = 920
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = +1
Query: 340 PLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYA 519
P+S ++ KG GP S + MSA + LA E+R + + EY
Sbjct: 306 PISTTCYANKQNVKGKGPMSAVIRASSLTFPNMSAIISTHLAGLPEEKRICLMDALGEYD 365
Query: 520 AKRLSSETREQR 555
+ S T +R
Sbjct: 366 KQAKESATEIER 377
>03_06_0316 + 33091194-33091370,33091451-33092155
Length = 293
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Frame = +1
Query: 340 PLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYA 519
P + +PKA + K P + + AK +A +SP + A + K +
Sbjct: 146 PKAAAKPKAAAKPKAKAPAKSKAAAKPKAAAKPAAKPKAAAKPKSPAKPAAKPKAAPKAK 205
Query: 520 AK-------------RLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSAYAA 660
AK + ++ T+ + AR A AA+ A +TP+++ A + A AA
Sbjct: 206 AKPAAKPKAKAAPKPKAAAVTKTKATSAPARRPAKAAKTSAKDTPSKKAAPAAKKPAAAA 265
>11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617
Length = 772
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 563 LIALCSLVSDESLLAAYSDIRF-SLVARCSGDSFASLCAAYADILASRAALSSDVSLFGP 387
L+A LVS AA + VA GDS + + +AD LA+R +L S + P
Sbjct: 405 LLACADLVSKGDHPAALRHLHLLRRVASPLGDSMQRVASHFADALAARLSLLSSPTSASP 464
Query: 386 EP 381
P
Sbjct: 465 SP 466
>09_03_0067 -
12035991-12036389,12036928-12037071,12037917-12037946,
12039881-12040159
Length = 283
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 443 HMQHRGWQMSHRNSAPLD*SVCPNM 517
H+QHR WQM H +AP+ CP++
Sbjct: 247 HLQHR-WQMQHAQTAPMI-PTCPSI 269
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = +1
Query: 373 RRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQ 552
RR+G SE EER ARL +M A A EQR +RLK+ ++ AK +S Q
Sbjct: 423 RRRGVQHMSE--EEREARLRQMQADAEVH-----EEQRWSRLKKAADDDAKEAASVNANQ 475
>06_01_0226 - 1730931-1731527,1732290-1732469
Length = 258
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +1
Query: 286 EQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLA 465
EQE + D+++ ++ + + RR+R G+ P + + R +++A A R
Sbjct: 160 EQEPAGQLRGSDVLRALERAAAAKEAKRRKRAGARPAARRQDAGERRGGELAAAGAAR-P 218
Query: 466 NESPEQRATRLKRMSEYAAKRL 531
E + ATR++ + E K+L
Sbjct: 219 IEIRREWATRIREL-ELRVKQL 239
>02_05_0665 -
30720842-30721003,30721290-30721448,30721555-30721687,
30722042-30722227,30722377-30722906
Length = 389
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = +1
Query: 349 LLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKR 528
LL P A R GSG S + AAR ++++A + P M +
Sbjct: 15 LLRPSAARAGSGSGNLSSSPPPPAARPSRLAALIGRAAGRRGPSMLVRETAAMQLERRRA 74
Query: 529 LSSETREQRAIRLARMSAYAARRLA 603
+ +R A+ +A A+AA A
Sbjct: 75 DWAHSRPVVALDIAWNVAFAAAAAA 99
>10_02_0071 + 4928899-4929465
Length = 188
Score = 28.7 bits (61), Expect = 4.3
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +1
Query: 319 DMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKM--SAYAAQRLANESPEQRAT 492
D++ + LS + KA +R G G S +S RAA + S + NE+ E
Sbjct: 36 DVVLRLIMLSAVS-KASVKRTGGGKASSSSSPRAAPPPPVMTSCRRDDSIRNEAVEDCIE 94
Query: 493 RLKRMS-EYAAKRLSSETREQRAIRLARMSAYAARR 597
LKR S E A +LSS T + + +AR A A +
Sbjct: 95 FLKRSSAEGDAAKLSSVTAAE-TVAVARDLAMATTK 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/91 (24%), Positives = 37/91 (40%)
Frame = +1
Query: 283 DEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRL 462
D T+N V EM+ S + +R+++ + TS+ A K + L
Sbjct: 118 DVAATVNDVGAEVKDDEMEAESAAPKRRKRKKEKEKERKTTSKVAEADAKKPPRHVRVML 177
Query: 463 ANESPEQRATRLKRMSEYAAKRLSSETREQR 555
+ + A L++ E KR + E R QR
Sbjct: 178 EVLAKRKEAEELRKREEELRKRKAEEERLQR 208
>12_01_0552 +
4469009-4469080,4470052-4470117,4470808-4470941,
4471073-4471179,4471695-4471802,4471879-4471949,
4472126-4472185,4472264-4472319,4472663-4472723,
4472809-4473076,4473174-4473355,4473444-4473736,
4474048-4474138
Length = 522
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 602 ASRRAAYADILANLIALCSLVSDESLLAAYSDIRFSLVARCSGDSFAS 459
++ R A IL CSL+ D S+L YSD + +A S D S
Sbjct: 343 STSRRKLASILHESGKKCSLIDDASVLERYSDASCNSIAVFSDDDALS 390
>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 329 KKWIHYHCWSLKRVDEGKAQDQRVKHQKREPHG*PRCLHMQH 454
++W+ C S D +QR++ ++R P +CLH+ H
Sbjct: 1281 RRWVCNECKSFYICDRCYNAEQRLEEKERHPSN-SKCLHILH 1321
>06_03_0234 + 18555036-18555264,18559110-18559234,18559506-18559925
Length = 257
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 379 KGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRA 558
KG GP E A MSA L EQR++ + ++EY + S +R
Sbjct: 134 KGKGPMVEAIRAPAYTFPNMSAIIWPHLGGLPNEQRSSLQESIAEYDRQAKESAVEIERH 193
Query: 559 IRL 567
R+
Sbjct: 194 FRI 196
>05_06_0066 +
25307863-25307871,25308431-25308570,25308712-25308754,
25308994-25310022
Length = 406
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/113 (22%), Positives = 50/113 (44%)
Frame = +1
Query: 283 DEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRL 462
++ +T+ T +P + EM + P+A ++ G G E A+L K A+
Sbjct: 39 EDSDTV-TAKPARAVFEMPHRT--SPRAPKKPAGGGAAVSRVAELEAKLGKAEGQLAEMR 95
Query: 463 ANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETPAQ 621
+ ++A + R + +K+ S ++ R+A A ++ A +TP Q
Sbjct: 96 EQLAAAEKARKDARAALVESKKRFSAAKK----RVATAGAASSSAAAEQTPPQ 144
>01_01_0051 + 389051-389623
Length = 190
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 590 AAYADILANLI-ALCSLVSDESLLAAYSDIRFSLVARCSGDSFASLCAAYADILASRAAL 414
A + D LA + ALC++ +D + A D + C+ + A + YADI A L
Sbjct: 2 ATFRDHLAVIAEALCAIAADMNAAARALDPSTVISLACAAFTVAIVLVCYADICGRLATL 61
Query: 413 SS 408
S
Sbjct: 62 HS 63
>01_06_1050 + 34125087-34126001,34126082-34126639
Length = 490
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 442 AYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAAR 594
A+ A+RL + PE+R A R+ E RE+ A LAR + +R
Sbjct: 241 AWRAKRLLDLEPERRMREALATIHGYADRIVRERRERGAAGLARKDDFLSR 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,994,094
Number of Sequences: 37544
Number of extensions: 305697
Number of successful extensions: 988
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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