Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28n02
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical ... 32 0.41
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 31 0.96
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 3.9
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 28 5.1
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 28 5.1
AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical... 28 6.8
U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical p... 27 8.9
U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical p... 27 8.9
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = +1
Query: 352 LEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRL 531
L +A R+R ETSEE RLAK + Y +R + E+ E+ RLKR +E
Sbjct: 71 LSKEAHRKRLRRA--RETSEETHTRLAKAADYKRKRCSEETEEEYRERLKRQAERKKMER 128
Query: 532 SSETREQRAIRLARMSAYAARRLANETPAQRQAR 633
E+ +Q R + + + + L E+ + Q R
Sbjct: 129 MQESEDQANNRRIKAAEHRRQYLQRESFEKAQER 162
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/81 (35%), Positives = 41/81 (50%)
Frame = +1
Query: 364 ARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSET 543
A RRRK +ET EE R AK + + NE+PE+ R +R + + L +ET
Sbjct: 167 AERRRKSL--LAETPEEAELRRAKNAQRRRDAIKNETPEEAENRRQRDAARRRQYLQTET 224
Query: 544 REQRAIRLARMSAYAARRLAN 606
EQ++ AR AAR+ N
Sbjct: 225 SEQKS---ARKIQDAARKRQN 242
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +1
Query: 358 PKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSS 537
P+A +R + S S +S E + ++ S+Y++ R + +P++ T +R S A S
Sbjct: 89 PEASKRSRRSRSSSNSSSESDSSSSRSSSYSS-RSRSRTPQRSRTSKRRRSNSHASEDSD 147
Query: 538 ETREQRAIR---LARMSAYAAR 594
+ RE+RA + L + AY AR
Sbjct: 148 DAREKRAFKQMMLDKKQAYLAR 169
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -3
Query: 656 AYADILNSLACLCAGVSLASRRAAYADILA 567
A IL S++C+C G+ L +RR+ YA++++
Sbjct: 24 ALISILFSISCICYGIWLLARRSQYAELVS 53
>AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical
protein F32D1.3 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 485 APLD*SVCPNMQLKDFHQRRENRERLGWQECLHMQPVDL 601
AP +V N+ L +FH + NR L +++ LH+ P L
Sbjct: 649 APESVTVLQNIALAEFHMQNYNRSLLFYRKALHLDPTHL 687
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 30.7 bits (66), Expect = 0.96
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 283 DEQETLNTVEPVDMIQEMDPLSLLEPKAR--RRRKGSGPKSETSEE-RAARLAKMSAYAA 453
+ QE+ +T + ++ +P +P + RRR+ PKSE++++ R + + Y
Sbjct: 543 EPQESPSTSTESQVSEDEEPCCSTDPASTTSRRRRIRSPKSESAKKPRKSSSPPLDDYLK 602
Query: 454 QRLANESPEQRATRLKR 504
+ ++ EQRA L++
Sbjct: 603 EMAVRQNHEQRAIHLRQ 619
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 394 KSETSEERAARLAKMSAYAAQRLANES--PEQRATRLKRMSEYAAKRLSSETREQRAIRL 567
K + ER AR + + +R+ E+ EQ+ KR E R+ E + +R +
Sbjct: 2548 KQRDAREREAREREAREHQ-ERMQREAYMKEQQLLERKRAIE-ENNRIMEEQQREREMEA 2605
Query: 568 ARMSAYAARRLANETPAQRQARL 636
AR A ARR A E A Q RL
Sbjct: 2606 ARKEA--ARRAAEEAYAAEQQRL 2626
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 454 QRLANESPEQ-RATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAA----RRLANETPA 618
QR NE ++ R KR+ E +RL + +R + R+ A RR+A + A
Sbjct: 214 QRKRNEELKRLRIAEEKRLLE-EQQRLREQMERERLAEIKRLEEAARLEDERRIAADIEA 272
Query: 619 QRQARLLRMSA 651
Q+QA L +M A
Sbjct: 273 QKQAMLQKMQA 283
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein
ZK430.1 protein.
Length = 1650
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 523 KRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLL 639
K + +ET+ + +R+ + SAY + +A P+Q ++ +L
Sbjct: 1078 KFIVAETKSEEKMRMCQNSAYTLKLIAKNLPSQSESLVL 1116
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 28.3 bits (60), Expect = 5.1
Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 11/123 (8%)
Frame = +1
Query: 307 VEPVDMIQEMDPLSLLEPKARR-RRKGSGPKSETSE-ERAARLAKMSAYAAQRLANE--- 471
+EP+ P +PKA+ +R S TS E AA LA + +L E
Sbjct: 368 MEPMSCDDSTPPARQHKPKAKATKRSAHAASSSTSNVEAAAALAALQEQQRIQLEQEQYL 427
Query: 472 ----SPEQRATRLKRMSEYAAKRLSSETREQRAIRLA--RMSAYAARRLANETPAQRQAR 633
E+R K M E A K RE++ LA R + A+ QA
Sbjct: 428 LQLAEDERRKREQKEMKEKAEKERQLRAREEQEHFLAVQREEQAQLEKQREREEAELQAT 487
Query: 634 LLR 642
L R
Sbjct: 488 LAR 490
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 28.3 bits (60), Expect = 5.1
Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 11/123 (8%)
Frame = +1
Query: 307 VEPVDMIQEMDPLSLLEPKARR-RRKGSGPKSETSE-ERAARLAKMSAYAAQRLANE--- 471
+EP+ P +PKA+ +R S TS E AA LA + +L E
Sbjct: 368 MEPMSCDDSTPPARQHKPKAKATKRSAHAASSSTSNVEAAAALAALQEQQRIQLEQEQYL 427
Query: 472 ----SPEQRATRLKRMSEYAAKRLSSETREQRAIRLA--RMSAYAARRLANETPAQRQAR 633
E+R K M E A K RE++ LA R + A+ QA
Sbjct: 428 LQLAEDERRKREQKEMKEKAEKERQLRAREEQEHFLAVQREEQAQLEKQREREEAELQAT 487
Query: 634 LLR 642
L R
Sbjct: 488 LAR 490
>AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical
protein T22D1.1 protein.
Length = 536
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 168 IVCFSYNHFLPRTICLT*ITHTDYSM 91
I C+ +HFLP+ C + H +S+
Sbjct: 506 IGCYQVHHFLPQETCFLGVRHCSFSL 531
>U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical
protein T26A5.2b protein.
Length = 641
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Frame = +1
Query: 220 HFRLSDECIQYDNXXXXXXXXDEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKS 399
HF SD C N DE + D++ + P +A RR+G
Sbjct: 337 HFVESDHCYSLLNAKSVNGKPDETVVKSCPIDEDLVFSVFPFQ-CGRRAEERRRG---YQ 392
Query: 400 ETSEERAARLAKMSAYAAQRLANESPE----QRATRLKRMSEYAAKRLSSETREQ 552
E+ E + K + + E+PE ++ T L +Y A++L + +Q
Sbjct: 393 ESQREVQSSTKKPDVKVEKNVKLEAPEKQNKRKDTALNPKEKYCAQKLEKQLNDQ 447
>U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical
protein T26A5.2a protein.
Length = 779
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Frame = +1
Query: 220 HFRLSDECIQYDNXXXXXXXXDEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKS 399
HF SD C N DE + D++ + P +A RR+G
Sbjct: 475 HFVESDHCYSLLNAKSVNGKPDETVVKSCPIDEDLVFSVFPFQ-CGRRAEERRRG---YQ 530
Query: 400 ETSEERAARLAKMSAYAAQRLANESPE----QRATRLKRMSEYAAKRLSSETREQ 552
E+ E + K + + E+PE ++ T L +Y A++L + +Q
Sbjct: 531 ESQREVQSSTKKPDVKVEKNVKLEAPEKQNKRKDTALNPKEKYCAQKLEKQLNDQ 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,906,120
Number of Sequences: 27780
Number of extensions: 271073
Number of successful extensions: 738
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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