Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28m15
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 32 0.23
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 31 0.41
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 31 0.41
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 31 0.41
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 31 0.54
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 31 0.54
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 31 0.71
Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 1.6
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 1.6
AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein. 29 1.6
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 2.2
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 28 5.0
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 6.6
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 6.6
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 6.6
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 6.6
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 27 8.7
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 8.7
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -1
Query: 188 IGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
+ E+C+ I E S +++C G A + C L++N SCDWP
Sbjct: 174 VSGEYCESDGNISKSECSNV-FFSCSEGIAHRRNCPANLVFNPAISSCDWP 223
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = -1
Query: 179 EHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPY 33
++C + G F + + C NG C GL+++E CD+ +
Sbjct: 237 QNCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEW 285
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 134 CT-RYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
CT R +C NG C L++NEN+ CD+P
Sbjct: 322 CTPRVLSCQNGRENIFECPPSLVFNENSLICDYP 355
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 128 RYWTCWNGTATEQLCIGGLLYNENAHSCDW 39
R+ C +G A C L+Y++N CDW
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDW 70
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 158 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
G FG + C ++ C NG + C GL ++ + CD P
Sbjct: 570 GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRP 610
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.41
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 158 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
GI + T + TC G A C L++N CDWP
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 158 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDW 39
G F + + C NG A C GL ++E+ CD+
Sbjct: 313 GYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 RYWTCWNGTATEQLCIGGLLYNENAHSCDW 39
++ TC G A C L+YNE CDW
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 146 HETSCT-RYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
H C+ R +C NG C L++N+ + CD+P
Sbjct: 411 HAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.41
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 158 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
GI + T + TC G A C L++N CDWP
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 158 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDW 39
G F + + C NG A C GL ++E+ CD+
Sbjct: 313 GYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 128 RYWTCWNGTATEQLCIGGLLYNENAHSCDW 39
++ TC G A C L+YNE CDW
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 146 HETSCT-RYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
H C+ R +C NG C L++N+ + CD+P
Sbjct: 411 HAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 40 QSQEWAFSLYKSPPMQ-SCSVAVPFQQVQYLVQ 135
Q Q+++ S + P+Q SCS A P QQV Y VQ
Sbjct: 46 QPQQYSCSCQNTAPVQTSCSCAQPVQQVTYQVQ 78
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 40 QSQEWAFSLYKSPPMQ-SCSVAVPFQQVQYLVQ 135
Q Q+++ S + P+Q SCS A P QQV Y VQ
Sbjct: 47 QPQQYSCSCQNTAPVQTSCSCAQPVQQVTYQVQ 79
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 30.7 bits (66), Expect = 0.71
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 194 PPIGTEHCDWLYGIFGHETSCT-RYWTCWNGTATEQLCIGGLLYNENAHSCDW 39
P + ++ C H C+ Y C NG A CI L+YN + +C++
Sbjct: 1017 PAVPSDFCTIRSNGLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNY 1069
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 137 SCTR-YWTCWNGTATEQLCIGGLLYNENAHSCDW 39
+CT+ ++TC +G A C G L++N+ +CD+
Sbjct: 445 ACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDF 478
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 152 FGHETSCTRY-WTCWNGTATEQLCIGGLLYNENAHSCDWP 36
F C+ Y W C NG + C L+Y + + CD+P
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFP 250
>Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical
protein C37A5.9 protein.
Length = 586
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 283 ISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
+S S+C P+ + S DS P TTR + GS ++S
Sbjct: 420 MSQSMCAPSYSSASSSYSRDSFAPAPTTRVNFAPGSSKSS 459
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFT 426
+T+ TS PTT A ++ + KPT T ET + S T+ +K T
Sbjct: 498 TTVQTSTTVPTTPSKTTATTTTTPKPTTT--ETATTSSSTTTVTTQKPTT 545
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFT 426
+T+ TS PTT A ++ + KPT T ET + S T+ +K T
Sbjct: 339 TTVQTSTTVPTTPSKTTATTTTTPKPTTT--ETATTSSSTTTVTTQKPTT 386
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFTS 429
ST++TS P+T T ++SS + TA++ + + S ++S ++ T+
Sbjct: 487 STVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFTS 429
ST++TS P+T T ++SS + TA++ + + S ++S ++ T+
Sbjct: 487 STVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFT 426
+T+ TS PTT A ++ + KPT T ET + S T+ +K T
Sbjct: 379 TTVQTSTTVPTTPSKTTATTTTTPKPTTT--ETATTSSSTTTVTTQKPTT 426
>AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein.
Length = 586
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 283 ISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
+S S+C P+ + S DS P TTR + GS ++S
Sbjct: 420 MSQSMCAPSYSSASSSYSRDSFAPAPTTRVNFAPGSSKSS 459
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 40 QSQEWAFSLYKSPPMQ-SCSVAVPFQQVQYLVQEVSWPKIPYSQSQCSV 183
Q QE + S + P+Q SCS A P QQ YLV P Q C +
Sbjct: 48 QPQETSCSCQNTAPVQTSCSCAQPVQQQTYLVPTSQC--APACQQSCQI 94
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 137 SCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWP 36
+C ++ C G C G ++N CDWP
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWP 1290
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 125 YWTCWNGTATEQLCIGGLLYNENAHSCDW 39
+++C N ++ C G ++N N SCD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 304 PTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEF 423
P T T + ++ SE+PT T T + ++ T L +EF
Sbjct: 266 PITTTTAETTTTTSEEPTVTEETTTELVTDVTIALPDEEF 305
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 316 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 459
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 316 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 459
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 280 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 280 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 280 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 280 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 316 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 459
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 316 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 459
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRET 375
+T T+ TTQ T ++ + KPT TT T
Sbjct: 328 TTFKTTTITTTTQTTTPTTTATTTKPTTTTPTT 360
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -1
Query: 182 TEHCDWLYGIFGHETSCTRYWTCWNGTATE-QLCIGGLLYNENA 54
T H W++ + TS Y T W+ T + G L N N+
Sbjct: 155 TAHSGWIWNMAQESTSTNFYTTSWDSTVKSWHITDNGALQNLNS 198
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
ST STS PTT T ++ + PT TT T + E T+
Sbjct: 58 STPSTSTSTPTTTTT--TTTTTTTTPTTTTTTTTTTTPEPTT 97
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 277 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 402
ST+ST P+T + +ASS + +T T S G+ E+S
Sbjct: 580 STVSTVSSQPSTYIPVSSASSIYSTLSGSTGSTASPGTTESS 621
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 252 EDQVYYLPS*SVNACFIFRSPNRHGALRLAVRYLWPRDLLHQV 124
++ V Y + V F+ R P + L + Y W +D HQV
Sbjct: 122 DESVQYEVTTGVGRYFVLRRPTLLASRNLDISYSWIKDDSHQV 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,110,071
Number of Sequences: 27780
Number of extensions: 214740
Number of successful extensions: 741
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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