Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28m13
         (197 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    22   2.3  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    21   4.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    21   7.1  

>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 96  VSPLIRGLRFAFLIAGIIYARGKXKLYXKMEA 191
           ++PLI  L    L   I+++RG  +   K+EA
Sbjct: 1   MTPLIATLAACALTLSIVHSRGLPESSDKLEA 32


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 42  SVLFDEVIMSLPYG 83
           S++FD +I   PYG
Sbjct: 301 SIVFDSIITDPPYG 314


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 75  PYGPPQPVS 101
           PY PPQP S
Sbjct: 380 PYQPPQPYS 388


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,973
Number of Sequences: 2352
Number of extensions: 3052
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 43
effective length of database: 462,843
effective search space used: 10182546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)