Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28m12
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 195 6e-51
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 161 1e-40
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 146 2e-36
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 136 4e-33
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 118 8e-28
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 104 1e-23
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 86 4e-18
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 66 3e-12
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 52 1e-07
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 6.0
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 6.0
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 7.9
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 195 bits (475), Expect = 6e-51
Identities = 94/150 (62%), Positives = 107/150 (71%)
Frame = +1
Query: 241 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 420
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 421 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 600
NFMIQ +SIYG RF DENFKL H G LSMANAG D+NGSQFFITTV
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTV 140
Query: 601 KTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 690
KTPWLDG HVVFG+VL G D+V+KI T
Sbjct: 141 KTPWLDGHHVVFGEVLSGYDIVKKISKAET 170
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 161 bits (390), Expect = 1e-40
Identities = 79/136 (58%), Positives = 90/136 (66%)
Frame = +1
Query: 271 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 450
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 451 XXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHV 630
+SIYGE+F DENF LKH G LSMANAG +TNGSQFFITTV TPWLDG+HV
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHV 125
Query: 631 VFGKVLEGMDVVQKIE 678
VFG+V EGMDVV+K+E
Sbjct: 126 VFGEVTEGMDVVKKVE 141
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 146 bits (355), Expect = 2e-36
Identities = 80/143 (55%), Positives = 92/143 (64%), Gaps = 4/143 (2%)
Frame = +1
Query: 262 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 429
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 430 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 609
M+Q SIYGE+FEDENF+LKH LSMANAG +TNGSQFFITTV TP
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTP 123
Query: 610 WLDGRHVVFGKVLEGMDVVQKIE 678
LDG+HVVFGKV++G V+ IE
Sbjct: 124 HLDGKHVVFGKVIQGKSTVRTIE 146
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 136 bits (328), Expect = 4e-33
Identities = 78/153 (50%), Positives = 92/153 (60%), Gaps = 9/153 (5%)
Frame = +1
Query: 265 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 420
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 421 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 597
+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 598 VKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA 696
V +LDG+HVVFG+V+EG D+V++IE T GA
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGA 157
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 118 bits (284), Expect = 8e-28
Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Frame = +1
Query: 295 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 474
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 475 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 651
SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT TPWLDG+H +FG+V+
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVS 124
Query: 652 GMDVVQKIEMTVT 690
G+ V +++ + T
Sbjct: 125 GLSVCKRMGLIRT 137
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 104 bits (249), Expect = 1e-23
Identities = 60/131 (45%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +1
Query: 301 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 480
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ES 519
Query: 481 IYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 657
I+ + FEDE + LKH +SMAN+G +TNGSQFFITT TPWLDG+H +F + G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 658 DVVQKIEMTVT 690
DVV +IE T
Sbjct: 580 DVVHRIEQGET 590
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 86.2 bits (204), Expect = 4e-18
Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +1
Query: 295 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 474
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 475 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 651
+SI+G+ F+DE LKH G +SMAN GK+TNGSQFFI LD +H +FG+V+
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVG 398
Query: 652 GMDVVQKIEMTVTGA 696
G++V+ +E T +
Sbjct: 399 GLNVLDALEKVPTNS 413
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 66.5 bits (155), Expect = 3e-12
Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +1
Query: 301 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 480
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGG-ES 77
Query: 481 IYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 648
IYGE F E +L+ G + MA + N SQFFIT TP +G+ +FG+V+
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 51.6 bits (118), Expect = 1e-07
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Frame = +1
Query: 289 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 468
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 469 XXRSIY-----GERFEDENF--KLKHYGAGWLSMANA---GKDTN----GSQFFIT-TVK 603
R ++ G RF F L H G +SM+ A +D GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 604 TPWLDGRHVVFGKVLEGMDVVQKI 675
LD R+ ++G+V EG D + KI
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKI 146
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -3
Query: 477 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 325
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 6.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 287 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 144
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 159 FSSFPCYFYKIRFECLFFQNLRY 91
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 115 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 267
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,840,942
Number of Sequences: 5004
Number of extensions: 58153
Number of successful extensions: 159
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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