Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28m11
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.2  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   2.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.8  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    24   3.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.6  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    23   8.8  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 413  PYLEVLTEKYSNSGDRFLAFERIQRTGERKLAGVCVANTVRPWK 544
            P L  +T++ +   D+F    +  +    KLAG  +   V  WK
Sbjct: 2880 PKLNSVTQQVTQRLDKFKEIGKALKENNLKLAGTLIKEEVGKWK 2923


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 409 FQRHPQTNDTGLPRPEMSVEERSY*FRVTLVA 314
           F  HP   +  L R  MS+++R++   +TL A
Sbjct: 261 FSTHPNGRNGILRRSSMSMKDRNFFINITLFA 292


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +2

Query: 260  YPTDKKPCFDLRNVSIEFGNQCHAKLIRSFLYTHFWPREPS---VVGLWMSL 406
            Y  DK+  F+L +V  E  N        S L   F P EP    +V  W+ +
Sbjct: 1337 YGVDKEWSFNLADVQFERDNHYLKLPASSTLKATFTPTEPKNLWIVSFWVRI 1388


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 617 EHRNTCGASLVLSRYCEPILPIP 549
           +HR  C  + + +RY +PI  +P
Sbjct: 293 KHRQICAVTRLPARYYDPITQLP 315


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 305 WIHSAGRNTVSCQLGKG 255
           WIH   R+ V+C L +G
Sbjct: 352 WIHHLARHAVACFLTRG 368


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 325 SREINTIVPLHSFLASGAQCRWSVDVFGMPL 417
           S +I T+  L   LA  A  + +  +FGMPL
Sbjct: 3   SFQIATLTVLLVLLAGTASAKKASTIFGMPL 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,406
Number of Sequences: 2352
Number of extensions: 14642
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)