Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28m10
         (487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-4|CAB02768.2|   64|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z79597-1|CAB01861.1|  271|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    27   9.5  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    27   9.5  
AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical ...    27   9.5  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    27   9.5  
AF078786-2|AAC26941.1|  889|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z81038-4|CAB02768.2|   64|Caenorhabditis elegans Hypothetical
           protein C25A1.6 protein.
          Length = 64

 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = +2

Query: 140 MYLRYYLNDKGDREYTLATIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQP 319
           M+LRY+L++   R YTL    P G+ TL+AHPARFSPEDK S++RIIIKKRFGLL TQ+ 
Sbjct: 1   MFLRYFLDENQQRVYTLKRTAPSGEQTLTAHPARFSPEDKNSKYRIIIKKRFGLLPTQKA 60

Query: 320 EPI 328
           + +
Sbjct: 61  KTV 63


>Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical
           protein D1046.4 protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -2

Query: 213 FPNGSMVANVYSLSPLSFK*YLRYILMLLKMQITKTTTNLALFYLYVVIQ*FLVFT-VQC 37
           F    ++ N+YS+  L F  +    ++++ + +TK   ++ L  LY  I  FL  T    
Sbjct: 356 FEKNPLLTNIYSIKFLQFSSFAGSAVIMITLFVTKFHFDIQLI-LYAAIFAFLSLTWPSV 414

Query: 36  FCVSNILS 13
           F  SNI+S
Sbjct: 415 FKSSNIIS 422


>Z79597-1|CAB01861.1|  271|Caenorhabditis elegans Hypothetical
           protein C33A11.2 protein.
          Length = 271

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 129 LKMQITKTTTNLALFYLYVVIQ*FLVFTVQCFCVS 25
           L  ++T T T   +FY  V+   F +F+V CFC S
Sbjct: 146 LTHRVTPTITLRTVFYYRVI---FTIFSVICFCCS 177


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 94  SAILFVCGNPVIPRVYCSVFL--CLKYIKCII 5
           S I+F+    V+P V+CS +L   + Y  CII
Sbjct: 200 SLIVFIVNVLVVPAVFCSTYLQFVVCYAACII 231


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 94  SAILFVCGNPVIPRVYCSVFL--CLKYIKCII 5
           S I+F+    V+P V+CS +L   + Y  CII
Sbjct: 200 SLIVFIVNVLVVPAVFCSTYLQFVVCYAACII 231


>AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical
            protein C26G2.2 protein.
          Length = 952

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 152  YYLNDKGDREYTLATIDPFGKPTLSAHPARFSP 250
            +YL  KG  E     +D     TLS  P+ FSP
Sbjct: 916  FYLKKKGVLEQLFRKLDRMKCNTLSTQPSAFSP 948


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 94  SAILFVCGNPVIPRVYCSVFL--CLKYIKCII 5
           S I+F+    V+P V+CS +L   + Y  CII
Sbjct: 200 SLIVFIVNVLVVPAVFCSTYLQFVVCYAACII 231


>AF078786-2|AAC26941.1|  889|Caenorhabditis elegans Hypothetical
           protein M01G5.1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 403 KRIVKMYQNLDHFGNFQYKS 344
           KR+  MY NL +FG FQ+ S
Sbjct: 216 KRMNAMYSNLMYFGEFQHTS 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,962,078
Number of Sequences: 27780
Number of extensions: 218801
Number of successful extensions: 447
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)