Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28m08
         (140 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2161|AAF48463.1|  916|Drosophila melanogaster CG6324-PA...    29   0.89 
X67703-4|CAA47940.1|   68|Drosophila melanogaster Mst84Dd protein.     26   8.3  
AM294196-1|CAL26100.1|   60|Drosophila melanogaster CG17956 prot...    26   8.3  

>AE014298-2161|AAF48463.1|  916|Drosophila melanogaster CG6324-PA
           protein.
          Length = 916

 Score = 29.1 bits (62), Expect = 0.89
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 135 RSGDAGPQIGRXSGGEQTGXQ*P 67
           +SG+ GP+ GR  GGE++G + P
Sbjct: 865 QSGEEGPRPGRFDGGEESGGRKP 887


>X67703-4|CAA47940.1|   68|Drosophila melanogaster Mst84Dd protein.
          Length = 68

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 3/24 (12%)
 Frame = +2

Query: 68  GYCXPVCSP---PDXRPICGPASP 130
           G C P C P   P   P CGP  P
Sbjct: 11  GPCGPCCGPCCGPCCGPCCGPCGP 34


>AM294196-1|CAL26100.1|   60|Drosophila melanogaster CG17956
           protein.
          Length = 60

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 3/24 (12%)
 Frame = +2

Query: 68  GYCXPVCSP---PDXRPICGPASP 130
           G C P C P   P   P CGP  P
Sbjct: 4   GPCGPCCGPCCGPCCGPCCGPCGP 27


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,654,525
Number of Sequences: 53049
Number of extensions: 48505
Number of successful extensions: 138
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 24,988,368
effective HSP length: 27
effective length of database: 23,556,045
effective search space used: 447564855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)