Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28m06
         (679 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0934 + 24539917-24539996,24540069-24540345                       30   2.0  
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395...    30   2.0  
09_02_0530 + 10285844-10287217                                         29   3.4  
05_03_0471 - 14455543-14455650,14455925-14456002,14456121-144562...    28   6.0  
10_08_0457 + 18076911-18077272,18077356-18077475,18077554-180777...    28   7.9  

>12_02_0934 + 24539917-24539996,24540069-24540345
          Length = 118

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 381 ERLKEEKKKMEDESAGWVPKNSG 449
           ++ KEE+ + EDES GW P+  G
Sbjct: 81  KKRKEERMEEEDESDGWAPRADG 103


>10_01_0359 +
           3956527-3956616,3957623-3957818,3958102-3959418,
           3959482-3960445,3960588-3960648,3961500-3961946
          Length = 1024

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 318 ESLANFFGITTPKYQLEIDEYERLKEEKKKMEDESA 425
           E   + F + T      ++EYE+LK EK+K+E E A
Sbjct: 722 EGSRDAFVVKTTVQMCSMEEYEQLKSEKRKLEMELA 757


>09_02_0530 + 10285844-10287217
          Length = 457

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 429 WVPKNSGGDIPLVLNEPGKDVTRQEA*Y 512
           WVP + GGDIPL L   G+D T   A Y
Sbjct: 47  WVPHHPGGDIPL-LTLAGQDATDAFAAY 73


>05_03_0471 -
           14455543-14455650,14455925-14456002,14456121-14456285,
           14457151-14457261,14457863-14458024,14458462-14458538,
           14459526-14460177
          Length = 450

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -2

Query: 414 LPFSFSLLLIFHTRLFQADILVLLC 340
           LPFS  LL++F  +  Q  IL+LLC
Sbjct: 185 LPFSLLLLVVFIRQHLQGLILILLC 209


>10_08_0457 +
           18076911-18077272,18077356-18077475,18077554-18077782,
           18077993-18078652,18079224-18079425,18079521-18079611,
           18079780-18079837
          Length = 573

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 363 LEIDEYERLKEEKKKMEDESAGWVPKN--SGGDIPLVLNE 476
           LEI+E   ++E+   +ED S  W+ K    GGDI   + E
Sbjct: 519 LEIEETGEIEEQLHILEDLSPDWISKKVIPGGDILYSIKE 558


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,854,419
Number of Sequences: 37544
Number of extensions: 254343
Number of successful extensions: 608
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)